RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 RASAL3Q86YV0 1011 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 CNPPD1Q9BV87 410 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 TRIM38O00635 465 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 MID1O15344 667 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 CCNYL3P0C7X3 344 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 TPTEP56180 551 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 OR2B6P58173 313 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 MTMR2Q13614 643 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 TCEA2Q15560 299 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 CRY1Q16526 586 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 KCNK18Q7Z418 384 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 RCN3Q96D15 328 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 TARS2Q9BW92 718 aaKnown RBP11.24□□□□□ -0.61
CHFR-201ENST00000266880 ZFP14Q9HCL3 533 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 MARK1Q9P0L2 795 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 KLQ9UEF7 1012 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 CNOT7Q9UIV1 285 aaKnown RBP11.24□□□□□ -0.61
CHFR-201ENST00000266880 ABHD14A-ACY1A0A1B0GW23 586 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 MAGEB2O15479 319 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 CD44P16070 742 aaKnown RBP11.24□□□□□ -0.61
CHFR-201ENST00000266880 SRSF11Q05519 484 aaKnown RBP11.24□□□□□ -0.61
CHFR-201ENST00000266880 E2F2Q14209 437 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 TBRG1Q3YBR2 411 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 ZCCHC9Q8N567 271 aaKnown RBP11.24□□□□□ -0.61
CHFR-201ENST00000266880 CHST4Q8NCG5 386 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 C3orf18Q9UK00 162 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 ARL5CA6NH57 179 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 KPNA3O00505 521 aaPredicted RBP11.24□□□□□ -0.61
CHFR-201ENST00000266880 RGS19P49795 217 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 ALX1Q15699 326 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 NOTUMQ6P988 496 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 LRRC69Q6ZNQ3 347 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 CLIP4Q8N3C7 705 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 OR4A15Q8NGL6 344 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 SMG7Q92540 1137 aaKnown RBP11.24□□□□□ -0.61
CHFR-201ENST00000266880 RIOK2Q9BVS4 552 aaKnown RBP11.24□□□□□ -0.61
CHFR-201ENST00000266880 TRIM2Q9C040 744 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 XKR8Q9H6D3 395 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 ST3GAL5Q9UNP4 418 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 BTRCQ9Y297 605 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 GNAO1P09471 354 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 SCN1BQ07699 218 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 ACSM2AQ08AH3 577 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 ACSM2BQ68CK6 577 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 AHSA2Q719I0 299 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHFR-201ENST00000266880 FLAD1Q8NFF5 587 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 SLC22A8Q8TCC7 542 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 ADGRL2O95490 1459 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 DPPA5A6NC42 116 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 ANKDD1BA6NHY2 528 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 DDX3XO00571 662 aaKnown RBP eCLIP11.24□□□□□ -0.611e-6■□□□□ 8.4
CHFR-201ENST00000266880 LHCGRP22888 699 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 PTCD2Q8WV60 388 aaKnown RBP11.24□□□□□ -0.61
CHFR-201ENST00000266880 CBWD1Q9BRT8 395 aa11.24□□□□□ -0.61
CHFR-201ENST00000266880 ZNF471Q9BX82 626 aaPredicted RBP11.24□□□□□ -0.61
CHFR-201ENST00000266880 IL4RP24394 825 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 MC1RQ01726 317 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 SEZ6Q53EL9 994 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 EPHA10Q5JZY3 1008 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 CRELD2Q6UXH1 353 aaPredicted RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 PIK3R3Q92569 461 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 KLHL5Q96PQ7 755 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 MAF1Q9H063 256 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 SCAF8Q9UPN6 1271 aaKnown RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 SLC5A3P53794 718 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 SMIM11AP58511 58 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 CCNG2Q16589 344 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 PDCD4Q53EL6 469 aaKnown RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 TOR1AIP1Q5JTV8 583 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 AADACL4Q5VUY2 407 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 GLT6D1Q7Z4J2 308 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 OR2L3Q8NG85 312 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 TP53INP1Q96A56 240 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 MOV10Q9HCE1 1003 aaKnown RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 POLR3BQ9NW08 1133 aaPredicted RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 GSG1L2A8MUP6 293 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 PSKH1P11801 424 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 ACOX1Q15067 660 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 IRF2BPLQ9H1B7 796 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 PSMD13Q9UNM6 376 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 RSL1D1O76021 490 aaKnown RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 PCDH8O95206 1070 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 MTHFRP42898 656 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 SPP2Q13103 211 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 LPCAT4Q643R3 524 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 MAFIPQ8WZ33 124 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 TMLHEQ9NVH6 421 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 LEF1Q9UJU2 399 aaPredicted RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 PCDHB7Q9Y5E2 793 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 RFX7Q2KHR2 1363 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 UNC5CO95185 931 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 TFRCP02786 760 aaKnown RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 DRD4P21917 467 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 HNF4AP41235 474 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 INTS11Q5TA45 600 aaKnown RBP11.23□□□□□ -0.61
CHFR-201ENST00000266880 CCDC28AQ8IWP9 274 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 MCOLN3Q8TDD5 553 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 BLOC1S4Q9NUP1 217 aa11.23□□□□□ -0.61
CHFR-201ENST00000266880 OPTCQ9UBM4 332 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms