RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 EPHA3P29320 983 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 PRDX6P30041 224 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 RPL14P50914 215 aaKnown RBP13.03□□□□□ -0.32
CPSF6-201ENST00000266679 TBX4P57082 545 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 TAS2R39P59534 338 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 USP46P62068 366 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 EFEMP1Q12805 493 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 CLLU1OSQ5K130 101 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 RBM20Q5T481 1227 aaKnown RBP13.03□□□□□ -0.32
CPSF6-201ENST00000266679 KIAA0930Q6ICG6 404 aaPredicted RBP13.03□□□□□ -0.32
CPSF6-201ENST00000266679 KDELC1Q6UW63 502 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 GLB1LQ6UWU2 654 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 SLC39A5Q6ZMH5 540 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 CCDC117Q8IWD4 279 aaPredicted RBP13.03□□□□□ -0.32
CPSF6-201ENST00000266679 DCP1BQ8IZD4 617 aaKnown RBP13.03□□□□□ -0.32
CPSF6-201ENST00000266679 CCNYL1Q8N7R7 359 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 C2CD4AQ8NCU7 369 aaPredicted RBP13.03□□□□□ -0.32
CPSF6-201ENST00000266679 KLHDC9Q8NEP7 349 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 ACTRT2Q8TDY3 377 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 PTCD2Q8WV60 388 aaKnown RBP13.03□□□□□ -0.32
CPSF6-201ENST00000266679 PYDC1Q8WXC3 89 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 NDNQ99608 321 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 OMDQ99983 421 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 NUF2Q9BZD4 464 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 ZDHHC2Q9UIJ5 367 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 SCML2Q9UQR0 700 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 TLR6Q9Y2C9 796 aa13.03□□□□□ -0.32
CPSF6-201ENST00000266679 J3KR12 359 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 HDAC3O15379 428 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 GRID2O43424 1007 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 CNTN5O94779 1100 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 COL6A2P12110 1019 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 PIK3R1P27986 724 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 CD86P42081 329 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 PSEN1P49768 467 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 PRKAA2P54646 552 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 SLC12A2P55011 1212 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 MLLT6P55198 1093 aaPredicted RBP13.02□□□□□ -0.33
CPSF6-201ENST00000266679 NKX3-2P78367 333 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 TBL3Q12788 808 aaKnown RBP13.02□□□□□ -0.33
CPSF6-201ENST00000266679 CCNIQ14094 377 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 PDCD2Q16342 344 aaPredicted RBP13.02□□□□□ -0.33
CPSF6-201ENST00000266679 PSMD5Q16401 504 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 TCHHL1Q5QJ38 904 aaPredicted RBP13.02□□□□□ -0.33
CPSF6-201ENST00000266679 TSTD2Q5T7W7 516 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 TMCO4Q5TGY1 634 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 CNSTQ6PJW8 725 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 RANBP10Q6VN20 620 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 LSMEM2Q8N112 164 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 NUP93Q8N1F7 819 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 TTC9BQ8N6N2 239 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 UCMAQ8WVF2 138 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 PABPC5Q96DU9 382 aaKnown RBP13.02□□□□□ -0.33
CPSF6-201ENST00000266679 GPR78Q96P69 363 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 SP110Q9HB58 689 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 FBXO5Q9UKT4 447 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 ARHGAP26Q9UNA1 814 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 LRCH1Q9Y2L9 728 aa13.02□□□□□ -0.33
CPSF6-201ENST00000266679 TTC24A2A3L6 582 aaPredicted RBP13.01□□□□□ -0.33
CPSF6-201ENST00000266679 WASH4PA8MWX3 477 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 TARM1B6A8C7 271 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 FKBP6O75344 327 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 SOAT2O75908 522 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 PEX11BO96011 259 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 HMBSP08397 361 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 HAPLN1P10915 354 aaPredicted RBP13.01□□□□□ -0.33
CPSF6-201ENST00000266679 CRABP2P29373 138 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 NRG1Q02297 640 aaPredicted RBP13.01□□□□□ -0.33
CPSF6-201ENST00000266679 DSC2Q02487 901 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 KLC1Q07866 573 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 PRKAA1Q13131 559 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 LSM12Q3MHD2 195 aaKnown RBP13.01□□□□□ -0.33
CPSF6-201ENST00000266679 ALFQ53S48 1182 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 ZNF789Q5FWF6 425 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 FAM26DQ5JW98 314 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 PPM1LQ5SGD2 360 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 NXNQ6DKJ4 435 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 CCSAPQ6IQ19 270 aaPredicted RBP13.01□□□□□ -0.33
CPSF6-201ENST00000266679 NEPROQ6NW34 567 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 MSANTD2Q6P1R3 559 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 ACAD11Q709F0 780 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 RTN4RL1Q86UN2 441 aaPredicted RBP13.01□□□□□ -0.33
CPSF6-201ENST00000266679 LCA5Q86VQ0 697 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 HIPK4Q8NE63 616 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 HEXDCQ8WVB3 486 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 LINC01599Q8WXQ3 324 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 MARK4Q96L34 752 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 SLC25A51Q9H1U9 297 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 S100A14Q9HCY8 104 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 DNAJB4Q9UDY4 337 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 SSX2IPQ9Y2D8 614 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 A0A1W2PQ45 241 aaPredicted RBP13.01□□□□□ -0.33
CPSF6-201ENST00000266679 A0A1W2PQY0 241 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 JUNP05412 331 aaKnown RBP13.01□□□□□ -0.33
CPSF6-201ENST00000266679 CPB1P15086 417 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 POLD2P49005 469 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 NUMBP49757 651 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 MS4A13Q5J8X5 152 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 MON1AQ86VX9 555 aa13.01□□□□□ -0.33
CPSF6-201ENST00000266679 CIR1Q86X95 450 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms