RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 USP13Q92995 863 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-201ENST00000266589 ATP2A3Q93084 1043 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 NSMCE3Q96MG7 304 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 FGFR1OP2Q9NVK5 253 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 ZDHHC7Q9NXF8 308 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 NSMCE4AQ9NXX6 385 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 DPP7Q9UHL4 492 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 CLEC4EQ9ULY5 219 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 ANKRD36A6QL64 1941 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 MYO7AQ13402 2215 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 CCDC195A0A1B0GUA6 201 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 PRAMEF12O95522 483 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 EPOP01588 193 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 CYBBP04839 570 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 ALADP13716 330 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 PBX2P40425 430 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 ETV4P43268 484 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 ABCG1P45844 678 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 ARCN1P48444 511 aaKnown RBP11.67□□□□□ -0.54
SCAF11-201ENST00000266589 CSE1LP55060 971 aaKnown RBP11.67□□□□□ -0.54
SCAF11-201ENST00000266589 INO80DQ53TQ3 878 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-201ENST00000266589 TSTD2Q5T7W7 516 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 GKAP1Q5VSY0 366 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-201ENST00000266589 APCDD1Q8J025 514 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 NUDCD1Q96RS6 583 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 TDP1Q9NUW8 608 aa11.67□□□□□ -0.54
SCAF11-201ENST00000266589 WDR91A4D1P6 747 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 EBAG9O00559 213 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 NDST3O95803 873 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 PRKCGP05129 697 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 CES1P23141 567 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 LMAN2Q12907 356 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 FYB2Q5VWT5 728 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 FSTL4Q6MZW2 842 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 CNTN4Q8IWV2 1026 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 DCLK2Q8N568 766 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 FIBINQ8TAL6 211 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 BLOC1S5Q8TDH9 187 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 LRRC8CQ8TDW0 803 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 ACMSDQ8TDX5 336 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 ING5Q8WYH8 240 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 SPOCK2Q92563 424 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 ZNF707Q96C28 371 aaPredicted RBP11.66□□□□□ -0.54
SCAF11-201ENST00000266589 TRIB3Q96RU7 358 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 MCMBPQ9BTE3 642 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 C2orf49Q9BVC5 232 aaPredicted RBP11.66□□□□□ -0.54
SCAF11-201ENST00000266589 KIAA1522Q9P206 1035 aaPredicted RBP11.66□□□□□ -0.54
SCAF11-201ENST00000266589 LHX3Q9UBR4 397 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 CHKBQ9Y259 395 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 FCF1Q9Y324 198 aaKnown RBP11.66□□□□□ -0.54
SCAF11-201ENST00000266589 PLLPQ9Y342 182 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 MROH6A6NGR9 719 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 TIMM44O43615 452 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 PAPSS2O95340 614 aaPredicted RBP11.66□□□□□ -0.54
SCAF11-201ENST00000266589 TOP3BO95985 862 aaKnown RBP11.66□□□□□ -0.54
SCAF11-201ENST00000266589 MT-CO1P00395 513 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 DHRS4L1P0CG22 281 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 CEBPBP17676 345 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 TYK2P29597 1187 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 CD70P32970 193 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 CRHR1P34998 444 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 SERPINB8P50452 374 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 HNRNPH2P55795 449 aaKnown RBP11.66□□□□□ -0.54
SCAF11-201ENST00000266589 RHOAP61586 193 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 MPP1Q00013 466 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 CTBP1Q13363 440 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 THOC5Q13769 683 aaKnown RBP11.66□□□□□ -0.54
SCAF11-201ENST00000266589 PDE1CQ14123 709 aaPredicted RBP11.66□□□□□ -0.54
SCAF11-201ENST00000266589 ZNF470Q6ECI4 717 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 ELMSAN1Q6PJG2 1045 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 RGS9BPQ6ZS82 235 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 DENND6AQ8IWF6 608 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 OR13J1Q8NGT2 312 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 PTPRN2Q92932 1015 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 VPS39Q96JC1 886 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 SEC16BQ96JE7 1060 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 ZSWIM3Q96MP5 696 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 FAM167BQ9BTA0 163 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 TDRD1Q9BXT4 1180 aaKnown RBP11.66□□□□□ -0.54
SCAF11-201ENST00000266589 SNX15Q9NRS6 342 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 GGT7Q9UJ14 662 aa11.66□□□□□ -0.54
SCAF11-201ENST00000266589 MTO1Q9Y2Z2 717 aaKnown RBP11.66□□□□□ -0.54
SCAF11-201ENST00000266589 BPTFQ12830 3046 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 SOBPA7XYQ1 873 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 K7ERQ8 282 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 ZNF197O14709 1029 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 LDB2O43679 373 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 SIN3BO75182 1162 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 PIRTP0C851 137 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 SLC1A2P43004 574 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 SF3A3Q12874 501 aaKnown RBP eCLIP11.65□□□□□ -0.54
SCAF11-201ENST00000266589 ZNF77Q15935 545 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 UGP2Q16851 508 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 RNF43Q68DV7 783 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 RETSATQ6NUM9 610 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 MICALCLQ6ZW33 695 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 NLRP9Q7RTR0 991 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 CMC1Q7Z7K0 106 aa11.65□□□□□ -0.54
SCAF11-201ENST00000266589 ZC3HC1Q86WB0 502 aaKnown RBP11.65□□□□□ -0.54
SCAF11-201ENST00000266589 CACNA2D3Q8IZS8 1091 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms