RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 PSKH2Q96QS6 385 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 SEMA3CQ99985 751 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 WRAP53Q9BUR4 548 aaKnown RBP7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 SEMA4AQ9H3S1 761 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 CAAP1Q9H8G2 361 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 EBF2Q9HAK2 575 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 RBM22Q9NW64 420 aaKnown RBP eCLIP7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 CHD8Q9HCK8 2581 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 PROB1E7EW31 1015 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 ALOX15BO15296 676 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 SLC31A1O15431 190 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 SPINT1O43278 529 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 RHOBTB1O94844 696 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 POP4O95707 220 aaKnown RBP7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 IGHV4-34P06331 123 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 MX2P20592 715 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 ITGB7P26010 798 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 VASPP50552 380 aaPredicted RBP7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 NEK3P51956 506 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 PPIDQ08752 370 aaKnown RBP7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 CCDC173Q0VFZ6 552 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 TRAF2Q12933 501 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 TFDP2Q14188 446 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 TAZQ16635 292 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 TRIM61Q5EBN2 209 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 USP30Q70CQ3 517 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 SRLQ86TD4 932 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 TTC7BQ86TV6 843 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 REXO1L1PQ8IX06 675 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 RNF10Q8N5U6 811 aaKnown RBP7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 PPP1R16AQ96I34 528 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 BRD8Q9H0E9 1235 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 SCUBE2Q9NQ36 999 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 SMARCAL1Q9NZC9 954 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 UBP1Q9NZI7 540 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 R3HDM2Q9Y2K5 976 aaKnown RBP7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 COQ6Q9Y2Z9 468 aa7.33□□□□□ -1.24
DEPDC1B-201ENST00000265036 A0A1W2PQU0 124 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 BCLAF3A2AJT9 711 aaKnown RBP7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 MIF4GDA9UHW6 222 aaKnown RBP7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 H0Y8X5 98 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 H7C0C1 242 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 WNT9AO14904 365 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 PPP1R12AO14974 1030 aaPredicted RBP7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 MATN3O15232 486 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 IGLV3-19P01714 112 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 SLC4A1P02730 911 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 SERPINA4P29622 427 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 ATP5OP48047 213 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 RAD51Q06609 339 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 BYSLQ13895 437 aaKnown RBP7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 PDK1Q15118 436 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 PPP2R5EQ16537 467 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 PCSK7Q16549 785 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZNF805Q5CZA5 627 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZNF569Q5MCW4 686 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 DENND2CQ68D51 928 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 SLC36A4Q6YBV0 504 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 BBS12Q6ZW61 710 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 METTL3Q86U44 580 aaKnown RBP7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 SLC35F6Q8N357 371 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 CNTD1Q8N815 330 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 TMIEQ8NEW7 156 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 ZC3H10Q96K80 434 aaKnown RBP7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 SLC6A18Q96N87 628 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 MGME1Q9BQP7 344 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 TLR10Q9BXR5 811 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 SEMA4GQ9NTN9 838 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 FZD4Q9ULV1 537 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 PCDHB9Q9Y5E1 797 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 LNP1A1A4G5 178 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 LRRC72A6NJI9 287 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 APOC4-APOC2K7ER74 178 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 PLRG1O43660 514 aaKnown RBP7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 EPN2O95208 641 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 MT-CYBP00156 380 aaPredicted RBP7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 APOC2P02655 101 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 RETP07949 1114 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 PDHA1P08559 390 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 CTPS1P17812 591 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 CR2P20023 1033 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 TGM2P21980 687 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 XPAP23025 273 aaPredicted RBP7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 OXTRP30559 389 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 CD86P42081 329 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 MAPK8P45983 427 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 BCL2L1Q07817 233 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 NIPAL4Q0D2K0 466 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 RPS6KA1Q15418 735 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 PRAMEF14Q5SWL7 426 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 SYCP2LQ5T4T6 812 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 SEL1L2Q5TEA6 688 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 MEI1Q5TIA1 1274 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 TIGD7Q6NT04 549 aaPredicted RBP7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 BBS5Q8N3I7 341 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 TRIM58Q8NG06 486 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 OR2T34Q8NGX1 318 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 SPATA22Q8NHS9 363 aa7.32□□□□□ -1.24
DEPDC1B-201ENST00000265036 TFB1MQ8WVM0 346 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms