RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 MROH1Q8NDA8 1641 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 EME2A4GXA9 379 aaPredicted RBP18.12■□□□□ 0.49
COL5A3-201ENST00000264828 PQBP1O60828 265 aaKnown RBP18.12■□□□□ 0.49
COL5A3-201ENST00000264828 AVILO75366 819 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 IL12AP29459 219 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 RALGDSQ12967 914 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 OLFML1Q6UWY5 402 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 MAT2BQ9NZL9 334 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 GLRA2P23416 452 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 COPZ1P61923 177 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 RBBP4Q09028 425 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 RNASE12Q5GAN4 147 aaKnown RBP18.12■□□□□ 0.49
COL5A3-201ENST00000264828 TTC23Q5W5X9 447 aa18.12■□□□□ 0.49
COL5A3-201ENST00000264828 PTCD3Q96EY7 689 aaKnown RBP18.12■□□□□ 0.49
COL5A3-201ENST00000264828 HGFP14210 728 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 RAB27AP51159 221 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 INTS11Q5TA45 600 aaKnown RBP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 AMER2Q8N7J2 671 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 ART4Q93070 314 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 RPRD1BQ9NQG5 326 aaKnown RBP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 ABCC13Q9NSE7 274 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 LRRC14BA6NHZ5 514 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 SIGLEC16A6NMB1 481 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 ADRB2P07550 413 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 POLR2EP19388 210 aaKnown RBP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 ATP5F1P24539 256 aaPredicted RBP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 FAM83AQ86UY5 434 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 ULK2Q8IYT8 1036 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 SNRNP25Q9BV90 132 aaKnown RBP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 EFR3BQ9Y2G0 817 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 IFNA16P05015 189 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 RPL4P36578 427 aaKnown RBP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 EPS8Q12929 822 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 APTXQ7Z2E3 356 aaKnown RBP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 WNT8BQ93098 351 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 NPAS2Q99743 824 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 MCUBQ9NWR8 336 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 ATP6AP2A0A1C7CYW4 349 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 UBE2QL1A1L167 161 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 FAM25EA8MYX2 175 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 ATP6AP2O75787 350 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 SERPINA4P29622 427 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 MTX3Q5HYI7 312 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 RNF19BQ6ZMZ0 732 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 PLGRKTQ9HBL7 147 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 ZNF232Q9UNY5 417 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 ANGPT4Q9Y264 503 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 ITGA3P26006 1051 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 MSX2P35548 267 aaPredicted RBP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 NR1H2P55055 460 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 ELAVL2Q12926 359 aaKnown RBP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 PDK4Q16654 411 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 DENND5AQ6IQ26 1287 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 PHF10Q8WUB8 498 aaKnown RBP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 LENG1Q96BZ8 264 aaPredicted RBP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 ELL3Q9HB65 397 aaPredicted RBP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 SLCO1B3Q9NPD5 702 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 DDX4Q9NQI0 724 aaKnown RBP18.11■□□□□ 0.49
COL5A3-201ENST00000264828 SLC35C2Q9NQQ7 365 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 ERGIC3Q9Y282 383 aa18.11■□□□□ 0.49
COL5A3-201ENST00000264828 NFASCO94856 1347 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 RCCD1A6NED2 376 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 PIRTP0C851 137 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 CASP7P55210 303 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 RAB10P61026 200 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 GALNT3Q14435 633 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 FBXL19Q6PCT2 694 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 AP3M1Q9Y2T2 418 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 RECQL4O94761 1208 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 ECDO95905 644 aaPredicted RBP18.1■□□□□ 0.49
COL5A3-201ENST00000264828 MED22Q15528 200 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 RFX4Q33E94 735 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 WSCD1Q658N2 575 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 CNSTQ6PJW8 725 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 COLGALT2Q8IYK4 626 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 CYP4X1Q8N118 509 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 ZNF483Q8TF39 744 aaPredicted RBP18.1■□□□□ 0.49
COL5A3-201ENST00000264828 TMPRSS4Q9NRS4 437 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 PNPOQ9NVS9 261 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 THG1LQ9NWX6 298 aaKnown RBP18.1■□□□□ 0.49
COL5A3-201ENST00000264828 MARCH2Q9P0N8 246 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 PCYOX1Q9UHG3 505 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 AP4B1Q9Y6B7 739 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 DEF8Q6ZN54 512 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 NKAPQ8N5F7 415 aaKnown RBP18.1■□□□□ 0.49
COL5A3-201ENST00000264828 SLC38A2Q96QD8 506 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 ADAM28Q9UKQ2 775 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 ZNF24P17028 368 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 PTPN1P18031 435 aaKnown RBP18.1■□□□□ 0.49
COL5A3-201ENST00000264828 PTPN5P54829 565 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 ARRDC4Q8NCT1 418 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 TRIT1Q9H3H1 467 aaKnown RBP18.1■□□□□ 0.49
COL5A3-201ENST00000264828 PIGUQ9H490 435 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 C3orf18Q9UK00 162 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 OR10H3O60404 316 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 FARP2O94887 1054 aaPredicted RBP18.1■□□□□ 0.49
COL5A3-201ENST00000264828 CCNB1P14635 433 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 NOS2P35228 1153 aa18.1■□□□□ 0.49
COL5A3-201ENST00000264828 CNTN2Q02246 1040 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms