RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 LIPMQ5VYY2 423 aa20.02■□□□□ 0.79
CSPG5-201ENST00000264723 SATL1Q86VE3 508 aa20.02■□□□□ 0.79
CSPG5-201ENST00000264723 TTC30BQ8N4P2 665 aa20.02■□□□□ 0.79
CSPG5-201ENST00000264723 TM6SF2Q9BZW4 377 aa20.02■□□□□ 0.79
CSPG5-201ENST00000264723 C15orf38-AP3S2A0A0A6YYH1 394 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 UQCRBP14927 111 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 GRIA3P42263 894 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 TAF10Q12962 218 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 PCLAFQ15004 111 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 PFKFB4Q16877 469 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 ARPINQ7Z6K5 226 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 DNAJC1Q96KC8 554 aaKnown RBP20.01■□□□□ 0.79
CSPG5-201ENST00000264723 VAT1Q99536 393 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 HAUS8Q9BT25 410 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 PCDHAC1Q9H158 963 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 SCUBE2Q9NQ36 999 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 RGS18Q9NS28 235 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 MYO7AQ13402 2215 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 HEATR9A2RTY3 570 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 INPP4BO15327 924 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 GJA5P36382 358 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 SH3BGRP55822 239 aaPredicted RBP20.01■□□□□ 0.79
CSPG5-201ENST00000264723 PSME3P61289 254 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 ROR2Q01974 943 aaKnown RBP20.01■□□□□ 0.79
CSPG5-201ENST00000264723 SFT2D3Q587I9 215 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 DCLRE1AQ6PJP8 1040 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 OSTM1Q86WC4 334 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 THAP11Q96EK4 314 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 TRMT6Q9UJA5 497 aaKnown RBP20.01■□□□□ 0.79
CSPG5-201ENST00000264723 RNF112Q9ULX5 631 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 BTRCQ9Y297 605 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 LRG1P02750 347 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 HNRNPCP07910 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
CSPG5-201ENST00000264723 DAOAP59103 153 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 GRIK3Q13003 919 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 MBLAC2Q68D91 279 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 CLEC20AQ6ZU45 233 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 FCRL3Q96P31 734 aaPredicted RBP20.01■□□□□ 0.79
CSPG5-201ENST00000264723 TBC1D13Q9NVG8 400 aa20.01■□□□□ 0.79
CSPG5-201ENST00000264723 AHCYL1O43865 530 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 TLR5O60602 858 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 AP2A1O95782 977 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 MT-ND1P03886 318 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 FGF3P11487 239 aaPredicted RBP20■□□□□ 0.79
CSPG5-201ENST00000264723 ENDOVQ8N8Q3 282 aaKnown RBP20■□□□□ 0.79
CSPG5-201ENST00000264723 MRPS31Q92665 395 aaKnown RBP20■□□□□ 0.79
CSPG5-201ENST00000264723 DCUN1D1Q96GG9 259 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 OLA1Q9NTK5 396 aaKnown RBP20■□□□□ 0.79
CSPG5-201ENST00000264723 EP400Q96L91 3159 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 C9IYK1 514 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 SPATA31D3P0C874 917 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 XRCC1P18887 633 aaPredicted RBP20■□□□□ 0.79
CSPG5-201ENST00000264723 NFKBIAP25963 317 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 OR1D2P34982 312 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 GJA9P57773 515 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 CAPRIN1Q14444 709 aaKnown RBP20■□□□□ 0.79
CSPG5-201ENST00000264723 DEFB115Q30KQ5 88 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 LIN52Q52LA3 116 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 GDF6Q6KF10 455 aaPredicted RBP20■□□□□ 0.79
CSPG5-201ENST00000264723 TPGS1Q6ZTW0 290 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 SPATA31D4Q6ZUB0 917 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 MYO1HQ8N1T3 1032 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 MAF1Q9H063 256 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 LZTS1Q9Y250 596 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 ABCA3Q99758 1704 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 MYL4P12829 197 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 WNT3AP56704 352 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 RAB10P61026 200 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 SLC5A9Q2M3M2 681 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 PCID2Q5JVF3 399 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 TBCELQ5QJ74 424 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 CIR1Q86X95 450 aaPredicted RBP20■□□□□ 0.79
CSPG5-201ENST00000264723 DENND1CQ8IV53 801 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 ZNF483Q8TF39 744 aaPredicted RBP20■□□□□ 0.79
CSPG5-201ENST00000264723 TMEM40Q8WWA1 233 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 PPP1R2P1Q96PQ5 205 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 CIB1Q99828 191 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 MRPL40Q9NQ50 206 aaKnown RBP20■□□□□ 0.79
CSPG5-201ENST00000264723 EURLQ9NYK6 297 aa20■□□□□ 0.79
CSPG5-201ENST00000264723 CNMDO75829 334 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 F2P00734 622 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 RPLP2P05387 115 aaKnown RBP19.99■□□□□ 0.79
CSPG5-201ENST00000264723 ITGAXP20702 1163 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 THOP1P52888 689 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 TAS2R39P59534 338 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 POU4F1Q01851 419 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 SOX4Q06945 474 aaPredicted RBP19.99■□□□□ 0.79
CSPG5-201ENST00000264723 GRB14Q14449 540 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 CLEC4FQ8N1N0 589 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 CD99L2Q8TCZ2 262 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 LMCD1Q9NZU5 365 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 GMIPQ9P107 970 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 CROTQ9UKG9 612 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 TOMM70O94826 608 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 TBX18O95935 607 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 MLNP12872 115 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 RPL17P18621 184 aaKnown RBP19.99■□□□□ 0.79
CSPG5-201ENST00000264723 LRPAP1P30533 357 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 CCNFP41002 786 aa19.99■□□□□ 0.79
CSPG5-201ENST00000264723 ELAVL2Q12926 359 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms