RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 TGFBIQ15582 683 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 CACHD1Q5VU97 1274 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 DENND5AQ6IQ26 1287 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 NIPAL1Q6NVV3 410 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 PDPRQ8NCN5 879 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 ST13P5Q8NFI4 369 aaPredicted RBP15.19■□□□□ 0.02
CASC3-201ENST00000264645 GAB3Q8WWW8 586 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 ACOX2Q99424 681 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 CATSPERBQ9H7T0 1116 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 IFT80Q9P2H3 777 aaPredicted RBP15.19■□□□□ 0.02
CASC3-201ENST00000264645 ZNF221Q9UK13 617 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.19■□□□□ 0.023e-6■■■■□ 23.8
CASC3-201ENST00000264645 SYNDIG1LA6NDD5 238 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 ADRA2BP18089 450 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 ADSLP30566 484 aaPredicted RBP15.19■□□□□ 0.02
CASC3-201ENST00000264645 SIM2Q14190 667 aaPredicted RBP15.19■□□□□ 0.02
CASC3-201ENST00000264645 RALGPS2Q86X27 583 aaPredicted RBP15.19■□□□□ 0.02
CASC3-201ENST00000264645 C19orf18Q8NEA5 215 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 OTUD5Q96G74 571 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 KLHL32Q96NJ5 620 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 HAPLN3Q96S86 360 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 PORCNQ9H237 461 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 RHOJQ9H4E5 214 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 TRMT6Q9UJA5 497 aaKnown RBP15.19■□□□□ 0.02
CASC3-201ENST00000264645 FBXO5Q9UKT4 447 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 TRIM64CA6NLI5 447 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 TFAP2AP05549 437 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 HMBSP08397 361 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 CYP2C9P11712 490 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 CPB1P15086 417 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 TTLL4Q14679 1199 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 ZNF423Q2M1K9 1284 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 MBLAC2Q68D91 279 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 TRAPPC12Q8WVT3 735 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 HDAC10Q969S8 669 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 NODALQ96S42 347 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 HOPXQ9BPY8 73 aaPredicted RBP15.19■□□□□ 0.02
CASC3-201ENST00000264645 SENP6Q9GZR1 1112 aaPredicted RBP15.19■□□□□ 0.02
CASC3-201ENST00000264645 ZNF232Q9UNY5 417 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 PMF1-BGLAPU3KQ54 211 aa15.19■□□□□ 0.02
CASC3-201ENST00000264645 BCLAF3A2AJT9 711 aaKnown RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 HTRA2O43464 458 aaPredicted RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 FADS2O95864 444 aaKnown RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 NFICP08651 508 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 THRBP10828 461 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 ACADVLP49748 655 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 TUBA4AP68366 448 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 RHDQ02161 417 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 ZRANB3Q5FWF4 1079 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 FSTL5Q8N475 847 aaPredicted RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 CERS5Q8N5B7 392 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 DDX1Q92499 740 aaKnown RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 DPY30Q9C005 99 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 LEF1Q9UJU2 399 aaPredicted RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 TRHDEQ9UKU6 1024 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 INVSQ9Y283 1065 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 WBP11Q9Y2W2 641 aaKnown RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 SLC30A1Q9Y6M5 507 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 H0Y858 1186 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 DENRO43583 198 aaKnown RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 WBP4O75554 376 aaKnown RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 BCAS2O75934 225 aaPredicted RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 YBX3P16989 372 aaKnown RBP eCLIP15.18■□□□□ 0.024e-8■■■□□ 18.1
CASC3-201ENST00000264645 MSH3P20585 1137 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 IRF9Q00978 393 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 KLHL17Q6TDP4 642 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 IFNLR1Q8IU57 520 aaPredicted RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 DMRTB1Q96MA1 342 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 PPM1MQ96MI6 270 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 ZNF696Q9H7X3 374 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 NT5MQ9NPB1 228 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 KLHL3Q9UH77 587 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 HEMK1Q9Y5R4 338 aaPredicted RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 GLP2RO95838 553 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 FTH1P02794 183 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 MAGEA10P43363 369 aaPredicted RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 AARS2Q5JTZ9 985 aaKnown RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 UGT2A3Q6UWM9 527 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 MILR1Q7Z6M3 343 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 SLC4A11Q8NBS3 891 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 PCDH19Q8TAB3 1148 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 ZNF516Q92618 1163 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 FBXL20Q96IG2 436 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 GLT1D1Q96MS3 346 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 DDX43Q9NXZ2 648 aaKnown RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 PSME2Q9UL46 239 aa15.18■□□□□ 0.02
CASC3-201ENST00000264645 COPG1Q9Y678 874 aaKnown RBP15.18■□□□□ 0.02
CASC3-201ENST00000264645 FUOMA2VDF0 154 aa15.17■□□□□ 0.02
CASC3-201ENST00000264645 NEMP2A6NFY4 417 aa15.17■□□□□ 0.02
CASC3-201ENST00000264645 TMEM233B4DJY2 109 aa15.17■□□□□ 0.02
CASC3-201ENST00000264645 G3V2T6 193 aa15.17■□□□□ 0.02
CASC3-201ENST00000264645 BUD23O43709 281 aaKnown RBP15.17■□□□□ 0.02
CASC3-201ENST00000264645 HOXD12P35452 270 aa15.17■□□□□ 0.02
CASC3-201ENST00000264645 CCT3P49368 545 aaKnown RBP15.17■□□□□ 0.02
CASC3-201ENST00000264645 TKTL1P51854 596 aa15.17■□□□□ 0.02
CASC3-201ENST00000264645 ZNF460Q14592 562 aa15.17■□□□□ 0.02
CASC3-201ENST00000264645 OGFRL1Q5TC84 451 aaPredicted RBP15.17■□□□□ 0.02
CASC3-201ENST00000264645 FOXB2Q5VYV0 432 aa15.17■□□□□ 0.02
CASC3-201ENST00000264645 PTRHD1Q6GMV3 140 aaKnown RBP15.17■□□□□ 0.02
CASC3-201ENST00000264645 GLYATQ6IB77 296 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms