RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 GMIPQ9P107 970 aa16.86■□□□□ 0.29
PHRF1-201ENST00000264555 PIRTP0C851 137 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 POLR2EP19388 210 aaKnown RBP16.85■□□□□ 0.29
PHRF1-201ENST00000264555 SFSWAPQ12872 951 aaKnown RBP16.85■□□□□ 0.29
PHRF1-201ENST00000264555 BBS7Q8IWZ6 715 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 CRYGNQ8WXF5 182 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 TRMOQ9BU70 441 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 A8MX80 341 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 HNRNPCL2B2RXH8 293 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 ZMPSTE24O75844 475 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 SMAD3P84022 425 aaKnown RBP16.85■□□□□ 0.29
PHRF1-201ENST00000264555 TRAF2Q12933 501 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 DUSP4Q13115 394 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 DEFB115Q30KQ5 88 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 TXNDC11Q6PKC3 985 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 TAC4Q86UU9 113 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 TWNKQ96RR1 684 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 IMPAD1Q9NX62 359 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 MTF2Q9Y483 593 aaPredicted RBP16.85■□□□□ 0.29
PHRF1-201ENST00000264555 UNCXA6NJT0 531 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 SEPT4O43236 478 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 KRT36O76013 467 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 LIMK2P53671 638 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 NUP107P57740 925 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 ULK2Q8IYT8 1036 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 CRYBG2Q8N1P7 616 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 NAT8LQ8N9F0 302 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 ATAD1Q8NBU5 361 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 OR52K2Q8NGK3 314 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 SPOCK2Q92563 424 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 UGT2B28Q9BY64 529 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 CLDN11O75508 207 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 TNFAIP8O95379 198 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 ANXA5P08758 320 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 PTPN3P26045 913 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 PSME3P61289 254 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 USP4Q13107 963 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 PIGWQ7Z7B1 504 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 SYTL1Q8IYJ3 562 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 OTULINQ96BN8 352 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 AP3M1Q9Y2T2 418 aa16.85■□□□□ 0.29
PHRF1-201ENST00000264555 PRR5-ARHGAP8B1AHC4 643 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 OR1D2P34982 312 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 CLK1P49759 484 aaKnown RBP16.84■□□□□ 0.29
PHRF1-201ENST00000264555 ARHGAP8P85298 464 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 LYPLAL1Q5VWZ2 237 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 BANPQ8N9N5 519 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 BRI3BPQ8WY22 251 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 PLEKHA8Q96JA3 519 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 OXCT2Q9BYC2 517 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-201ENST00000264555 ZDHHC6Q9H6R6 413 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 PRR23AA6NEV1 266 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 MATN3O15232 486 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 HNRNPLP14866 589 aaKnown RBP eCLIP16.84■□□□□ 0.29
PHRF1-201ENST00000264555 ELNP15502 786 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 TYMPP19971 482 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 GRK3P35626 688 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 YBEYP58557 167 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-201ENST00000264555 ACOX1Q15067 660 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 TRMT11Q7Z4G4 463 aaKnown RBP16.84■□□□□ 0.29
PHRF1-201ENST00000264555 BPIFA1Q9NP55 256 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 SELENONQ9NZV5 590 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 IGSF9Q9P2J2 1179 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 hCG_2014768A0A024R1R8 64 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-201ENST00000264555 IFRD1O00458 451 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-201ENST00000264555 TMEM63AO94886 807 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 TCF4P15884 667 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 SELPP16109 830 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 SEMA5AQ13591 1074 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 CLYBLQ8N0X4 340 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 CLEC4CQ8WTT0 213 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 EXOC2Q96KP1 924 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 TM6SF2Q9BZW4 377 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 SPAG4Q9NPE6 437 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 NT5C1B-RDH14C9J2C7 533 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 GLUD2P49448 558 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 CDC16Q13042 620 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 RIPK1Q13546 671 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 C9orf16Q9BUW7 83 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 NMUR2Q9GZQ4 415 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 THG1LQ9NWX6 298 aaKnown RBP16.84■□□□□ 0.29
PHRF1-201ENST00000264555 AHSPQ9NZD4 102 aa16.84■□□□□ 0.29
PHRF1-201ENST00000264555 APOA1P02647 267 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 CREB1P16220 341 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 S100A5P33763 92 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 C12orf65Q9H3J6 166 aaKnown RBP16.83■□□□□ 0.29
PHRF1-201ENST00000264555 RAD18Q9NS91 495 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 YJEFN3A6XGL0 299 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 SYN3O14994 580 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 PIK3R1P27986 724 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 GPC1P35052 558 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 ZC3H12BQ5HYM0 836 aaKnown RBP16.83■□□□□ 0.29
PHRF1-201ENST00000264555 TXNRD3NBQ6F5E7 133 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 ADAMTSL2Q86TH1 951 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 CYP4X1Q8N118 509 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 TMEM132CQ8N3T6 1108 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 REPS1Q96D71 796 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 RNF145Q96MT1 663 aa16.83■□□□□ 0.29
PHRF1-201ENST00000264555 PRPF19Q9UMS4 504 aaKnown RBP16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms