RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 AGBL4Q5VU57 503 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 FAM46CQ5VWP2 391 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 PRR23BQ6ZRT6 265 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 ARMCX6Q7L4S7 300 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 KBTBD6Q86V97 674 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 ZSWIM9Q86XI8 627 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 CDKL3Q8IVW4 592 aaPredicted RBP18.54■□□□□ 0.56
SDF4-201ENST00000263741 GPR161Q8N6U8 529 aaKnown RBP18.54■□□□□ 0.56
SDF4-201ENST00000263741 SLC35B2Q8TB61 432 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 NUDCD1Q96RS6 583 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 TUBB2BQ9BVA1 445 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 BRD8Q9H0E9 1235 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 PCDHGC4Q9Y5F7 938 aa18.54■□□□□ 0.56
SDF4-201ENST00000263741 HACD1B0YJ81 288 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 ZNF217O75362 1048 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 PRKCGP05129 697 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 C7P10643 843 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 HSPA9P38646 679 aaKnown RBP18.53■□□□□ 0.56
SDF4-201ENST00000263741 RAD51Q06609 339 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 ZNF33AQ06730 810 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 PIP5KL1Q5T9C9 394 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 NCEH1Q6PIU2 408 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 CEP68Q76N32 757 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 ZNF567Q8N184 647 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 TTC13Q8NBP0 860 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 PDCD6IPQ8WUM4 868 aaKnown RBP18.53■□□□□ 0.56
SDF4-201ENST00000263741 CAPZA3Q96KX2 299 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 TMEM121Q9BTD3 319 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 GPR174Q9BXC1 333 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 DYRK4Q9NR20 520 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 ZNF446Q9NWS9 450 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 KLHL8Q9P2G9 620 aaPredicted RBP18.53■□□□□ 0.56
SDF4-201ENST00000263741 ITM2BQ9Y287 266 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 ATP8A1Q9Y2Q0 1164 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 TP53BP1Q12888 1972 aaPredicted RBP18.53■□□□□ 0.56
SDF4-201ENST00000263741 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 ITIH2P19823 946 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 ITGB7P26010 798 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 CD6P30203 668 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 GDF10P55107 478 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 SEMG2Q02383 582 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 NSUN2Q08J23 767 aaKnown RBP eCLIP18.53■□□□□ 0.56
SDF4-201ENST00000263741 TRAF2Q12933 501 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 ZNF805Q5CZA5 627 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 TMEFF1Q8IYR6 380 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 ARRDC2Q8TBH0 407 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 PHOX2BQ99453 314 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 AP1M1Q9BXS5 423 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 ATP13A3Q9H7F0 1226 aa18.53■□□□□ 0.56
SDF4-201ENST00000263741 CTAGE9A4FU28 777 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 C16orf96A6NNT2 1141 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 LIASO43766 372 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 IGLV3-19P01714 112 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 NFKB1P19838 968 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 CD68P34810 354 aaPredicted RBP18.52■□□□□ 0.56
SDF4-201ENST00000263741 ABL2P42684 1182 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 CSNK1DP48730 415 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 ADPRHP54922 357 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 AP1S1P61966 158 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 RPL6Q02878 288 aaKnown RBP18.52■□□□□ 0.56
SDF4-201ENST00000263741 SIM2Q14190 667 aaPredicted RBP18.52■□□□□ 0.56
SDF4-201ENST00000263741 TEX44Q53QW1 395 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 PAF1Q8N7H5 531 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 FAM71DQ8N9W8 422 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 OR14C36Q8NHC7 312 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 PBKQ96KB5 322 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 CPEB1Q9BZB8 566 aaKnown RBP18.52■□□□□ 0.56
SDF4-201ENST00000263741 WSB2Q9NYS7 404 aaPredicted RBP18.52■□□□□ 0.56
SDF4-201ENST00000263741 GGT7Q9UJ14 662 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 SCML1Q9UN30 329 aa18.52■□□□□ 0.56
SDF4-201ENST00000263741 PI4KAP42356 2102 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 MAP3K13O43283 966 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 MMP2P08253 660 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 SERPINA4P29622 427 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 CD86P42081 329 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 TAS2R38P59533 333 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 TUBB4BP68371 445 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 BCL2L1Q07817 233 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 ALG1LQ6GMV1 187 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 ZC3H14Q6PJT7 736 aaKnown RBP18.51■□□□□ 0.55
SDF4-201ENST00000263741 USP30Q70CQ3 517 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 ERN2Q76MJ5 926 aaKnown RBP18.51■□□□□ 0.55
SDF4-201ENST00000263741 PRUNE1Q86TP1 453 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 RASGEF1CQ8N431 466 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 SPATA22Q8NHS9 363 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 CCDC110Q8TBZ0 833 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 PPP1R16AQ96I34 528 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 RBM15Q96T37 977 aaKnown RBP eCLIP18.51■□□□□ 0.557e-7■□□□□ 10.2
SDF4-201ENST00000263741 OSBPL1AQ9BXW6 950 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 BTBD1Q9H0C5 482 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 SUV39H2Q9H5I1 410 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 USP29Q9HBJ7 922 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 UBP1Q9NZI7 540 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 NCKAP1Q9Y2A7 1128 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 MYLKQ15746 1914 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 LAMA1P25391 3075 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 ADRB3P13945 408 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 CFAP58Q5T655 872 aa18.51■□□□□ 0.55
SDF4-201ENST00000263741 TAB3Q8N5C8 712 aaPredicted RBP18.51■□□□□ 0.55
SDF4-201ENST00000263741 LRIG1Q96JA1 1093 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms