RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ST8SIA6P61647 398 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 SNRPD1P62314 119 aaKnown RBP9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 HIF1AQ16665 826 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 MYLK3Q32MK0 819 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 POM121L1PQ3SYA9 428 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 BEND6Q5SZJ8 279 aaPredicted RBP9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 CERCAMQ5T4B2 595 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 LRRC8BQ6P9F7 803 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 RANBP10Q6VN20 620 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 TPRG1Q6ZUI0 275 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 MICALCLQ6ZW33 695 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 RALGPS2Q86X27 583 aaPredicted RBP9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 PCDH20Q8N6Y1 951 aaKnown RBP9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 EIF1ADQ8N9N8 165 aaKnown RBP9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 DNAAF3Q8N9W5 541 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 MCUQ8NE86 351 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 GRIN3AQ8TCU5 1115 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 DNASE1L2Q92874 299 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 ISG20Q96AZ6 181 aaKnown RBP9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 C9orf72Q96LT7 481 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 FSD1LQ9BXM9 530 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 SEMA4AQ9H3S1 761 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 ZDHHC6Q9H6R6 413 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 C8orf33Q9H7E9 229 aaPredicted RBP9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 CASS4Q9NQ75 786 aa9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 POLR3BQ9NW08 1133 aaPredicted RBP9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 THAP10Q9P2Z0 257 aaPredicted RBP9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 NDRG2Q9UN36 371 aaKnown RBP9.84□□□□□ -0.83
SNRNP40-201ENST00000263694 CCDC78A2IDD5 438 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 GOLGA6CA6NDK9 693 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 GOLGA6BA6NDN3 693 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 PSMD3O43242 534 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 SIN3BO75182 1162 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 IGSF6O95976 241 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 GSRP00390 522 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 TUBBP07437 444 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 CTSLP07711 333 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 ATXN1LP0C7T5 689 aaKnown RBP9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 GOLGA6DP0CG33 693 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 SLC8A1P32418 973 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 ELK3P41970 407 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 MAGEA4P43358 317 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 TNFRSF4P43489 277 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 KIR2DL1P43626 348 aaPredicted RBP9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 VASPP50552 380 aaPredicted RBP9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 METAP1P53582 386 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 ARL4CP56559 192 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 CDK16Q00536 496 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 CDK18Q07002 472 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 EIF4HQ15056 248 aaKnown RBP9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 SLC1A5Q15758 541 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 KYNUQ16719 465 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 CCDC38Q502W7 563 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 TMEM196Q5HYL7 178 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 SIRPB2Q5JXA9 342 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 C9orf64Q5T6V5 341 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 CES3Q6UWW8 571 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 SERPINA13PQ6UXR4 307 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 CAPN12Q6ZSI9 719 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 TMC3Q7Z5M5 1100 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 ZBED8Q8IZ13 594 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 PDIK1LQ8N165 341 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 STK40Q8N2I9 435 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 ZNF513Q8N8E2 541 aaPredicted RBP9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 UHMK1Q8TAS1 419 aaKnown RBP9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 UCMAQ8WVF2 138 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 ANKRD7Q92527 254 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 IFT43Q96FT9 208 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 SIGLEC10Q96LC7 697 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 TRIB3Q96RU7 358 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 TXLNGYQ9BZA5 131 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 CEP44Q9C0F1 390 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 TMEM245Q9H330 911 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 CD320Q9NPF0 282 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 SLC2A4RGQ9NR83 387 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 VPS45Q9NRW7 570 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 SYBUQ9NX95 663 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 GOLGA6AQ9NYA3 693 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 DUSP12Q9UNI6 340 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 CHMP2BQ9UQN3 213 aa9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.83□□□□□ -0.84
SNRNP40-201ENST00000263694 CXorf51AA0A1B0GTR3 108 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 LOC285095A0A1B0GVY8 99 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 ERI2A8K979 691 aaKnown RBP9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 TRAFD1O14545 582 aaPredicted RBP9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 DYNC1I1O14576 645 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 PPFIA2O75334 1257 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 ERLIN1O75477 346 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 POP4O95707 220 aaKnown RBP9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 UGT2B4P06133 528 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 EPHX1P07099 455 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 CTPS1P17812 591 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 CES1P23141 567 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 MAGEA3P43357 314 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 CSNK1DP48730 415 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 SARNPP82979 210 aaKnown RBP9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 PFKPQ01813 784 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 SEMG2Q02383 582 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 BCL2L1Q07817 233 aa9.82□□□□□ -0.84
SNRNP40-201ENST00000263694 CDH17Q12864 832 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms