RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 HTRA2O43464 458 aaPredicted RBP16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 SOCS5O75159 536 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 ZNF217O75362 1048 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 ITGB7P26010 798 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 TPMTP51580 245 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 TUBB2AQ13885 445 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 ZNF528Q3MIS6 628 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 USP30Q70CQ3 517 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 GSTA5Q7RTV2 222 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 CCDC89Q8N998 374 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 GLIS1Q8NBF1 620 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 SPATA4Q8NEY3 305 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 SPATA22Q8NHS9 363 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 SPOCK2Q92563 424 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 FAM131CQ96AQ9 280 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 RBM15Q96T37 977 aaKnown RBP eCLIP16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 TUBB2BQ9BVA1 445 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 FAM126AQ9BYI3 521 aaPredicted RBP16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 DDX47Q9H0S4 455 aaKnown RBP16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 CD93Q9NPY3 652 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 FBXL12Q9NXK8 326 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 DKK3Q9UBP4 350 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 FEZ2Q9UHY8 353 aaPredicted RBP16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 MRFAP1Q9Y605 127 aa16.79■□□□□ 0.28
CHCHD3-201ENST00000262570 A0A1W2PP55 124 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 C16orf96A6NNT2 1141 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 MT-CYBP00156 380 aaPredicted RBP16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 IGLV3-19P01714 112 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 ETS1P14921 441 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 CNTN1Q12860 1018 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 SFSWAPQ12872 951 aaKnown RBP16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 TRAF2Q12933 501 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 SLC14A2Q15849 920 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 WHAMMP3Q1A5X7 153 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 ARHGEF18Q6ZSZ5 1173 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 ZNF572Q7Z3I7 529 aaPredicted RBP16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 PRUNE1Q86TP1 453 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 KBTBD6Q86V97 674 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 WDR5BQ86VZ2 330 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 LONP2Q86WA8 852 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 HDDC3Q8N4P3 179 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 GORASP1Q9BQQ3 440 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 HDAC8Q9BY41 377 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 VPS45Q9NRW7 570 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 SERGEFQ9UGK8 458 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 PCYOX1Q9UHG3 505 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 RAI2Q9Y5P3 530 aa16.78■□□□□ 0.28
CHCHD3-201ENST00000262570 TSPAN11A1L157 253 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 FZD6O60353 706 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 RNASEH2AO75792 299 aaKnown RBP16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 METTL18O95568 372 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 ZSCAN5DPP0CG00 497 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 SP9P0CG40 484 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 PSMB4P28070 264 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 ACTN2P35609 894 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 P2RY2P41231 377 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 FNTBP49356 437 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 PARP6Q2NL67 630 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 MAP7D1Q3KQU3 841 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 BRAT1Q6PJG6 821 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 ERN2Q76MJ5 926 aaKnown RBP16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 PARS2Q7L3T8 475 aaKnown RBP16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 ZSWIM9Q86XI8 627 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 RLN3Q8WXF3 142 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 OXNAD1Q96HP4 312 aaPredicted RBP16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 OMDQ99983 421 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 TDRD1Q9BXT4 1180 aaKnown RBP16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 NEUROG2Q9H2A3 272 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 DYRK4Q9NR20 520 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 UBP1Q9NZI7 540 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 FAM153AQ9UHL3 310 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 FZD4Q9ULV1 537 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 NCKAP1Q9Y2A7 1128 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 NEU2Q9Y3R4 380 aa16.77■□□□□ 0.28
CHCHD3-201ENST00000262570 A0A1W2PQ67 120 aa16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 F5H423 210 aaPredicted RBP16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 PLK4O00444 970 aa16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 PRLP01236 227 aa16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 RPL22P35268 128 aaKnown RBP16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 CKAP4Q07065 602 aaKnown RBP16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 CCDC15Q0P6D6 951 aa16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 USP39Q53GS9 565 aaKnown RBP16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 PIP5KL1Q5T9C9 394 aa16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 AGBL4Q5VU57 503 aa16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 KLHL7Q8IXQ5 586 aa16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 KLHDC8BQ8IXV7 354 aa16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 GANCQ8TET4 914 aa16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 GRK7Q8WTQ7 553 aa16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 SLCO2A1Q92959 643 aa16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 PAK5Q9P286 719 aa16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 PCDHB9Q9Y5E1 797 aa16.77■□□□□ 0.27
CHCHD3-201ENST00000262570 ANXA9O76027 345 aa16.76■□□□□ 0.27
CHCHD3-201ENST00000262570 PGLSO95336 258 aa16.76■□□□□ 0.27
CHCHD3-201ENST00000262570 PDHA1P08559 390 aa16.76■□□□□ 0.27
CHCHD3-201ENST00000262570 ADRB3P13945 408 aa16.76■□□□□ 0.27
CHCHD3-201ENST00000262570 TIMP2P16035 220 aa16.76■□□□□ 0.27
CHCHD3-201ENST00000262570 CA4P22748 312 aa16.76■□□□□ 0.27
CHCHD3-201ENST00000262570 OXTRP30559 389 aa16.76■□□□□ 0.27
CHCHD3-201ENST00000262570 NEK3P51956 506 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms