RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 MPPE1Q53F39 396 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 ALFQ53S48 1182 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 ALKBH2Q6NS38 261 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 C16orf62Q7Z3J2 963 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 THOC1Q96FV9 657 aaKnown RBP8.31□□□□□ -1.08
PTPN3-201ENST00000262539 AGAP3Q96P47 875 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 CYP4F11Q9HBI6 524 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 RIC8BQ9NVN3 520 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 PHTF1Q9UMS5 762 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 GTF2A1LQ9UNN4 478 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 C15orf38-AP3S2A0A0A6YYH1 394 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 MFSD11O43934 449 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 CKMP06732 381 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 MYL2P10916 166 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 CCNFP41002 786 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 HIST2H2ACQ16777 129 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-201ENST00000262539 HIST2H2AA3Q6FI13 130 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 UNC5AQ6ZN44 842 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 TMC7Q7Z402 723 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 ARPINQ7Z6K5 226 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 TMEM135Q86UB9 458 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 BANPQ8N9N5 519 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 PIWIL2Q8TC59 973 aaKnown RBP8.31□□□□□ -1.08
PTPN3-201ENST00000262539 AGR3Q8TD06 166 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 SCOCQ9UIL1 159 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 PPIEQ9UNP9 301 aaKnown RBP8.31□□□□□ -1.08
PTPN3-201ENST00000262539 PCDHB9Q9Y5E1 797 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 PCDHGA4Q9Y5G9 962 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 EIF3FO00303 357 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-201ENST00000262539 NRP1O14786 923 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 GJB6O95452 261 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 GALTP07902 379 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 ENO3P13929 434 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-201ENST00000262539 LMO2P25791 158 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 SSTR1P30872 391 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 PLOD1Q02809 727 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-201ENST00000262539 SNCBQ16143 134 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 ADGRF1Q5T601 910 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 OSGEPL1Q9H4B0 414 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 MOCS1Q9NZB8 636 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 ADA2Q9NZK5 511 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 RPS6KB2Q9UBS0 482 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 INSL6Q9Y581 213 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 MTMR11A4FU01 709 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 GSNP06396 782 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 ZNF7P17097 686 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-201ENST00000262539 CALB2P22676 271 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 CRYMQ14894 314 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 DLK2Q6UY11 383 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 PLEKHM3Q6ZWE6 761 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 MIB1Q86YT6 1006 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 C4orf33Q8N1A6 199 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 IPMKQ8NFU5 416 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 DEFB118Q96PH6 123 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 PANX3Q96QZ0 392 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 ZCCHC2Q9C0B9 1178 aaKnown RBP8.31□□□□□ -1.08
PTPN3-201ENST00000262539 GOLGA2P5Q9HBQ8 144 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 WDR6Q9NNW5 1121 aaKnown RBP8.31□□□□□ -1.08
PTPN3-201ENST00000262539 OGDHLQ9ULD0 1010 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 TPBGLP0DKB5 382 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 HPGDP15428 266 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 TNNI3P19429 210 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 SGO1Q5FBB7 561 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 SYCP2LQ5T4T6 812 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 METTL2BQ6P1Q9 378 aaKnown RBP8.31□□□□□ -1.08
PTPN3-201ENST00000262539 AFTPHQ6ULP2 937 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 DSG4Q86SJ6 1040 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 DNAAF5Q86Y56 855 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 CAMKK1Q8N5S9 505 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 ZNF614Q8N883 585 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 LRIG1Q96JA1 1093 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 SMAD5Q99717 465 aaKnown RBP8.31□□□□□ -1.08
PTPN3-201ENST00000262539 FLRT1Q9NZU1 646 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 TELO2Q9Y4R8 837 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 PCDHB1Q9Y5F3 818 aa8.31□□□□□ -1.08
PTPN3-201ENST00000262539 KCNK1O00180 336 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 PPEF2O14830 753 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 GLP2RO95838 553 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 CLTBP09497 229 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 OR1E1P30953 314 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 TTPAP49638 278 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 FAM45BPQ6NSW5 357 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 FAM126BQ8IXS8 530 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 KRT78Q8N1N4 520 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 FAM45AQ8TCE6 357 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 CCDC28BQ9BUN5 200 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 SLC2A11Q9BYW1 496 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 CDHR5Q9HBB8 845 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.3□□□□□ -1.08
PTPN3-201ENST00000262539 IL37Q9NZH6 218 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 CTNNAL1Q9UBT7 734 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 TIMM13Q9Y5L4 95 aaPredicted RBP8.3□□□□□ -1.08
PTPN3-201ENST00000262539 SKAP2O75563 359 aaPredicted RBP8.3□□□□□ -1.08
PTPN3-201ENST00000262539 ITGA2BP08514 1039 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 SERPINA4P29622 427 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 RHOAP61586 193 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 GNA12Q03113 381 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 TNK2Q07912 1038 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 GPR33Q49SQ1 333 aa8.3□□□□□ -1.08
PTPN3-201ENST00000262539 GSTCDQ8NEC7 633 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms