RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 MTSS1O43312 755 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 LIASO43766 372 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 GSRP00390 522 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 ITGAVP06756 1048 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 GKP32189 559 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 P2RY2P41231 377 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 RGRP47804 291 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 PSMD8P48556 350 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 CCNHP51946 323 aaPredicted RBP11.72□□□□□ -0.53
PFDN1-201ENST00000261813 METAP1P53582 386 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 RHOAP61586 193 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 ZNF33AQ06730 810 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 C2orf54Q08AI8 447 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 RFTN1Q14699 578 aaPredicted RBP11.72□□□□□ -0.53
PFDN1-201ENST00000261813 LBRQ14739 615 aaKnown RBP11.72□□□□□ -0.53
PFDN1-201ENST00000261813 PDK1Q15118 436 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 SIX1Q15475 284 aaPredicted RBP11.72□□□□□ -0.53
PFDN1-201ENST00000261813 CST6Q15828 149 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 MAP7D1Q3KQU3 841 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 TMCO4Q5TGY1 634 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 ZC3H14Q6PJT7 736 aaKnown RBP11.72□□□□□ -0.53
PFDN1-201ENST00000261813 C4orf22Q6V702 233 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 CDKL3Q8IVW4 592 aaPredicted RBP11.72□□□□□ -0.53
PFDN1-201ENST00000261813 KLHL7Q8IXQ5 586 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 GPR161Q8N6U8 529 aaKnown RBP11.72□□□□□ -0.53
PFDN1-201ENST00000261813 TSEN2Q8NCE0 465 aaKnown RBP11.72□□□□□ -0.53
PFDN1-201ENST00000261813 OR6K2Q8NGY2 324 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 ACTL9Q8TC94 416 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 ZNF419Q96HQ0 510 aaPredicted RBP11.72□□□□□ -0.53
PFDN1-201ENST00000261813 EXOC2Q96KP1 924 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 CCDC114Q96M63 670 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 TSGA13Q96PP4 275 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 LGMNQ99538 433 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 HINFPQ9BQA5 517 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 RAB17Q9H0T7 212 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 SMARCAL1Q9NZC9 954 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 USP36Q9P275 1121 aaKnown RBP11.72□□□□□ -0.53
PFDN1-201ENST00000261813 MAP10Q9P2G4 905 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 SERGEFQ9UGK8 458 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 PPM1HQ9ULR3 514 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 CYP8B1Q9UNU6 501 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 ZNF148Q9UQR1 794 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 INVSQ9Y283 1065 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 WASF2Q9Y6W5 498 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 DMDP11532 3685 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 EML5Q05BV3 1969 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 VPS13AQ96RL7 3174 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 IGHV1OR15-9A0A0B4J2B8 117 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 TCRBV7S2A1N4TA0A589 114 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 MID1O15344 667 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 INSIG1O15503 277 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 RNASEH1O60930 286 aaKnown RBP11.71□□□□□ -0.53
PFDN1-201ENST00000261813 GJB3O75712 270 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 ECEL1O95672 775 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 IGSF6O95976 241 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 IL1BP01584 269 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 DNTTP04053 509 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 BCKDHBP21953 392 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 CCNCP24863 283 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 ACTN2P35609 894 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 RECQLP46063 649 aaPredicted RBP11.71□□□□□ -0.53
PFDN1-201ENST00000261813 TPMTP51580 245 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 EIF3EP60228 445 aaKnown RBP11.71□□□□□ -0.53
PFDN1-201ENST00000261813 SNRPD1P62314 119 aaKnown RBP11.71□□□□□ -0.53
PFDN1-201ENST00000261813 SH3BP2P78314 561 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 DR1Q01658 176 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 OTUD4Q01804 1114 aaKnown RBP11.71□□□□□ -0.53
PFDN1-201ENST00000261813 ZBTB16Q05516 673 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 PPIDQ08752 370 aaKnown RBP11.71□□□□□ -0.53
PFDN1-201ENST00000261813 NOMO1Q15155 1222 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 POM121L1PQ3SYA9 428 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 TEX35Q5T0J7 233 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 FAM182AQ5T1J6 154 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 TIGD7Q6NT04 549 aaPredicted RBP11.71□□□□□ -0.53
PFDN1-201ENST00000261813 B4GALNT4Q76KP1 1039 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 GSTA5Q7RTV2 222 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 DGLUCYQ7Z3D6 616 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 CCDC13Q8IYE1 715 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 PGBD5Q8N414 524 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 AADATQ8N5Z0 425 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 TEX26Q8N6G2 289 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 SLC35B2Q8TB61 432 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 PIP4K2CQ8TBX8 421 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 GRIN3AQ8TCU5 1115 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 C1orf54Q8WWF1 131 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 GAB3Q8WWW8 586 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 MAML1Q92585 1016 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 FATE1Q969F0 183 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 MRGPRX2Q96LB1 330 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 PSKH2Q96QS6 385 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 HEPHQ9BQS7 1158 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 CINPQ9BW66 212 aaPredicted RBP11.71□□□□□ -0.53
PFDN1-201ENST00000261813 DDX47Q9H0S4 455 aaKnown RBP11.71□□□□□ -0.53
PFDN1-201ENST00000261813 PABPC3Q9H361 631 aaKnown RBP11.71□□□□□ -0.53
PFDN1-201ENST00000261813 ZDHHC6Q9H6R6 413 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 ITM2CQ9NQX7 267 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 IL36AQ9UHA7 158 aa11.71□□□□□ -0.53
PFDN1-201ENST00000261813 EVLQ9UI08 416 aaPredicted RBP11.71□□□□□ -0.53
PFDN1-201ENST00000261813 MBD1Q9UIS9 605 aaPredicted RBP11.71□□□□□ -0.53
PFDN1-201ENST00000261813 UTP11Q9Y3A2 253 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms