RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 NCEH1Q6PIU2 408 aa18.96■□□□□ 0.63
CYSTM1-201ENST00000261811 TTC7BQ86TV6 843 aa18.96■□□□□ 0.63
CYSTM1-201ENST00000261811 ZC3H18Q86VM9 953 aaKnown RBP18.96■□□□□ 0.63
CYSTM1-201ENST00000261811 SYT12Q8IV01 421 aa18.96■□□□□ 0.63
CYSTM1-201ENST00000261811 DEFB119Q8N690 84 aa18.96■□□□□ 0.63
CYSTM1-201ENST00000261811 CEP76Q8TAP6 659 aa18.96■□□□□ 0.63
CYSTM1-201ENST00000261811 SNX19Q92543 992 aa18.96■□□□□ 0.63
CYSTM1-201ENST00000261811 VAT1Q99536 393 aa18.96■□□□□ 0.63
CYSTM1-201ENST00000261811 ARRDC1-AS1Q9H2J1 176 aa18.96■□□□□ 0.63
CYSTM1-201ENST00000261811 TRMT1Q9NXH9 659 aaKnown RBP18.96■□□□□ 0.63
CYSTM1-201ENST00000261811 SAE1Q9UBE0 346 aaPredicted RBP18.96■□□□□ 0.63
CYSTM1-201ENST00000261811 VPS13AQ96RL7 3174 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 BCLAF3A2AJT9 711 aaKnown RBP18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 KCNK1O00180 336 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 KCNK3O14649 394 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 AP1G1O43747 822 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 SOCS5O75159 536 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 STK10O94804 968 aaKnown RBP18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 PCDH8O95206 1070 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 JCHAINP01591 159 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 PECAM1P16284 738 aaPredicted RBP18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 CCR5P51681 352 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 ELP6Q0PNE2 266 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 NOMO1Q15155 1222 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 PIP5KL1Q5T9C9 394 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 PRPF39Q86UA1 669 aaKnown RBP18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 CDKL3Q8IVW4 592 aaPredicted RBP18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 REXO1L1PQ8IX06 675 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 NDUFAF2Q8N183 169 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 PIGKQ92643 395 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 FEM1CQ96JP0 617 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 IL12RB2Q99665 862 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 SEMA3CQ99985 751 aa18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 C6orf106Q9H6K1 298 aaPredicted RBP18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 TP53BP1Q12888 1972 aaPredicted RBP18.95■□□□□ 0.62
CYSTM1-201ENST00000261811 PLXNA2O75051 1894 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 PRR5-ARHGAP8B1AHC4 643 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 PLK4O00444 970 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 TSPAN6O43657 245 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 PIGNO95427 931 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 SERPINF2P08697 491 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 MPLP40238 635 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 PTGER3P43115 390 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 RGRP47804 291 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 METAP1P53582 386 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 MAXP61244 160 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 OTUD4Q01804 1114 aaKnown RBP18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 ADCY2Q08462 1091 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 PRKD1Q15139 912 aaPredicted RBP18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 SLC45A4Q5BKX6 768 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 ZNF569Q5MCW4 686 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 ERAP2Q6P179 960 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 PARS2Q7L3T8 475 aaKnown RBP18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 ASCL5Q7RTU5 278 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 CAMK1DQ8IU85 385 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 SLC41A1Q8IVJ1 513 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 ACTL9Q8TC94 416 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 MAIP1Q8WWC4 291 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 VPS45Q9NRW7 570 aa18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.94■□□□□ 0.62
CYSTM1-201ENST00000261811 LRRK1Q38SD2 2015 aa18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 ZFHX2Q9C0A1 2572 aaPredicted RBP18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 MUSKO15146 869 aa18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 CR2P20023 1033 aa18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 EIF3EP60228 445 aaKnown RBP18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 KIAA1161Q6NSJ0 714 aa18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 DARS2Q6PI48 645 aaKnown RBP18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 TRIM69Q86WT6 500 aa18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 PGBD5Q8N414 524 aa18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 PDCD6IPQ8WUM4 868 aaKnown RBP18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 HTR3CQ8WXA8 447 aa18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 DNASE2BQ8WZ79 361 aa18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 BIRC7Q96CA5 298 aa18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 QKIQ96PU8 341 aaKnown RBP eCLIP18.93■□□□□ 0.621e-14■■■■■ 59.5
CYSTM1-201ENST00000261811 FRMD8P1Q9BZ68 369 aaPredicted RBP18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 MIR1-1HGQ9H1L0 117 aa18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 NOD2Q9HC29 1040 aa18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 ATP8A1Q9Y2Q0 1164 aa18.93■□□□□ 0.62
CYSTM1-201ENST00000261811 TSPAN11A1L157 253 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 RNGTTO60942 597 aaKnown RBP18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 HLA-DQB2P05538 268 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 RBP3P10745 1247 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 ITPKAP23677 461 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 CD27P26842 260 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 TNNT3P45378 269 aaPredicted RBP18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 RPS21P63220 83 aaKnown RBP18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 UGP2Q16851 508 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 DUOXA1Q1HG43 343 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 SETMARQ53H47 684 aaPredicted RBP18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 TEX44Q53QW1 395 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 ALG1LQ6GMV1 187 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 AADACL2Q6P093 401 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 LRRN4Q8WUT4 740 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 SKA1Q96BD8 255 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 AGAP3Q96P47 875 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 PILRBQ9UKJ0 227 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 TRHDEQ9UKU6 1024 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 FADS3Q9Y5Q0 445 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 ADAMTS9Q9P2N4 1935 aa18.92■□□□□ 0.62
CYSTM1-201ENST00000261811 OTOGLQ3ZCN5 2332 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms