RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 Q6ZNB5 142 aa27.94■■■□□ 2.06
CCM2-201ENST00000258781 GAREM2Q75VX8 874 aa27.94■■■□□ 2.06
CCM2-201ENST00000258781 ARL14EPQ8N8R7 260 aaPredicted RBP27.94■■■□□ 2.06
CCM2-201ENST00000258781 ADAMTS19Q8TE59 1207 aa27.94■■■□□ 2.06
CCM2-201ENST00000258781 MRPS31Q92665 395 aaKnown RBP27.94■■■□□ 2.06
CCM2-201ENST00000258781 MTO1Q9Y2Z2 717 aaKnown RBP27.94■■■□□ 2.06
CCM2-201ENST00000258781 GREM1O60565 184 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 BPGMP07738 259 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 GSTA1P08263 222 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 ATXN1LP0C7T5 689 aaKnown RBP27.93■■■□□ 2.06
CCM2-201ENST00000258781 GABRR2P28476 465 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 TSTD2Q5T7W7 516 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 TXNDC8Q6A555 127 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 CXorf57Q6NSI4 855 aaKnown RBP27.93■■■□□ 2.06
CCM2-201ENST00000258781 HJURPQ8NCD3 748 aaPredicted RBP27.93■■■□□ 2.06
CCM2-201ENST00000258781 GPR22Q99680 433 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 FAM167BQ9BTA0 163 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 SLC2A6Q9UGQ3 507 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 EMCNQ9ULC0 261 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 HCFC2Q9Y5Z7 792 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 NOTCH4Q99466 2003 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 TROVE2P10155 538 aaKnown RBP eCLIP27.93■■■□□ 2.06
CCM2-201ENST00000258781 HLA-DPA1P20036 260 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 CNGA3Q16281 694 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 N4BP2L1Q5TBK1 243 aaPredicted RBP27.93■■■□□ 2.06
CCM2-201ENST00000258781 ATG16L1Q676U5 607 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 NLRP9Q7RTR0 991 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 ZC3HC1Q86WB0 502 aaKnown RBP27.93■■■□□ 2.06
CCM2-201ENST00000258781 ZNF398Q8TD17 642 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 CINPQ9BW66 212 aaPredicted RBP27.93■■■□□ 2.06
CCM2-201ENST00000258781 HCFC1R1Q9NWW0 138 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 CPQQ9Y646 472 aa27.93■■■□□ 2.06
CCM2-201ENST00000258781 TTC24A2A3L6 582 aaPredicted RBP27.92■■■□□ 2.06
CCM2-201ENST00000258781 GOLGA8TH3BQL2 631 aa27.92■■■□□ 2.06
CCM2-201ENST00000258781 GFRA2O00451 464 aa27.92■■■□□ 2.06
CCM2-201ENST00000258781 FGF1P05230 155 aa27.92■■■□□ 2.06
CCM2-201ENST00000258781 SERPINF2P08697 491 aa27.92■■■□□ 2.06
CCM2-201ENST00000258781 POLD2P49005 469 aa27.92■■■□□ 2.06
CCM2-201ENST00000258781 CDK18Q07002 472 aa27.92■■■□□ 2.06
CCM2-201ENST00000258781 THOC5Q13769 683 aaKnown RBP27.92■■■□□ 2.06
CCM2-201ENST00000258781 NUDCD3Q8IVD9 361 aa27.92■■■□□ 2.06
CCM2-201ENST00000258781 FAM217AQ8IXS0 508 aa27.92■■■□□ 2.06
CCM2-201ENST00000258781 IFT43Q96FT9 208 aa27.92■■■□□ 2.06
CCM2-201ENST00000258781 ABCF3Q9NUQ8 709 aa27.92■■■□□ 2.06
CCM2-201ENST00000258781 USH1CQ9Y6N9 552 aa27.92■■■□□ 2.06
CCM2-201ENST00000258781 RFXAPO00287 272 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 PLIN3O60664 434 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 TOP3BO95985 862 aaKnown RBP27.91■■■□□ 2.06
CCM2-201ENST00000258781 LAMB3Q13751 1172 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 RNF219Q5W0B1 726 aaPredicted RBP27.91■■■□□ 2.06
CCM2-201ENST00000258781 CMC1Q7Z7K0 106 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 ELMOD1Q8N336 334 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 GBP7Q8N8V2 638 aaPredicted RBP27.91■■■□□ 2.06
CCM2-201ENST00000258781 GABPB2Q8TAK5 448 aaPredicted RBP27.91■■■□□ 2.06
CCM2-201ENST00000258781 E2F7Q96AV8 911 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 ATXN7L3BQ96GX2 97 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 TYW5A2RUC4 315 aaKnown RBP27.91■■■□□ 2.06
CCM2-201ENST00000258781 TGDSO95455 350 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 CES1P23141 567 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 SLC7A9P82251 487 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 CYP4F8P98187 520 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 C10orf82Q8WW14 230 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 CORO1BQ9BR76 489 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 MECRQ9BV79 373 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 LSM7Q9UK45 103 aaKnown RBP27.91■■■□□ 2.06
CCM2-201ENST00000258781 C5orf42Q9H799 3197 aa27.91■■■□□ 2.06
CCM2-201ENST00000258781 MROH6A6NGR9 719 aa27.9■■■□□ 2.06
CCM2-201ENST00000258781 TBL1XO60907 577 aa27.9■■■□□ 2.06
CCM2-201ENST00000258781 FSBPO95073 299 aa27.9■■■□□ 2.06
CCM2-201ENST00000258781 GLDCP23378 1020 aa27.9■■■□□ 2.06
CCM2-201ENST00000258781 CSRP3P50461 194 aa27.9■■■□□ 2.06
CCM2-201ENST00000258781 PPM1JQ5JR12 505 aa27.9■■■□□ 2.06
CCM2-201ENST00000258781 KIAA0408Q6ZU52 694 aa27.9■■■□□ 2.06
CCM2-201ENST00000258781 C2CD4AQ8NCU7 369 aaPredicted RBP27.9■■■□□ 2.06
CCM2-201ENST00000258781 CALML6Q8TD86 181 aa27.9■■■□□ 2.06
CCM2-201ENST00000258781 RMDN2Q96LZ7 410 aa27.9■■■□□ 2.06
CCM2-201ENST00000258781 MUC3BQ9H195 1237 aa27.9■■■□□ 2.06
CCM2-201ENST00000258781 C1RP00736 705 aa27.89■■■□□ 2.06
CCM2-201ENST00000258781 PROCP04070 461 aa27.89■■■□□ 2.06
CCM2-201ENST00000258781 PFKLP17858 780 aa27.89■■■□□ 2.06
CCM2-201ENST00000258781 CDC25CP30307 473 aa27.89■■■□□ 2.06
CCM2-201ENST00000258781 CCDC15Q0P6D6 951 aa27.89■■■□□ 2.06
CCM2-201ENST00000258781 GRM3Q14832 879 aa27.89■■■□□ 2.06
CCM2-201ENST00000258781 CCDC153Q494R4 210 aa27.89■■■□□ 2.06
CCM2-201ENST00000258781 CLEC14AQ86T13 490 aa27.89■■■□□ 2.06
CCM2-201ENST00000258781 ZNF510Q9Y2H8 683 aa27.89■■■□□ 2.06
CCM2-201ENST00000258781 XIRP2A4UGR9 3374 aa27.89■■■□□ 2.06
CCM2-201ENST00000258781 HELZP42694 1942 aaKnown RBP27.89■■■□□ 2.06
CCM2-201ENST00000258781 GSRP00390 522 aa27.89■■■□□ 2.05
CCM2-201ENST00000258781 AHSGP02765 367 aa27.89■■■□□ 2.05
CCM2-201ENST00000258781 GJA1P17302 382 aa27.89■■■□□ 2.05
CCM2-201ENST00000258781 GABRB3P28472 473 aa27.89■■■□□ 2.05
CCM2-201ENST00000258781 ALDH3A1P30838 453 aa27.89■■■□□ 2.05
CCM2-201ENST00000258781 CCR2P41597 374 aa27.89■■■□□ 2.05
CCM2-201ENST00000258781 ABCG1P45844 678 aa27.89■■■□□ 2.05
CCM2-201ENST00000258781 ZXDBP98169 803 aa27.89■■■□□ 2.05
CCM2-201ENST00000258781 ZNF697Q5TEC3 545 aa27.89■■■□□ 2.05
CCM2-201ENST00000258781 NEPROQ6NW34 567 aa27.89■■■□□ 2.05
CCM2-201ENST00000258781 C16orf46Q6P387 395 aa27.89■■■□□ 2.05
CCM2-201ENST00000258781 PEX13Q92968 403 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms