RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 NANPQ8TBE9 248 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ZYG11BQ9C0D3 744 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 GOLPH3Q9H4A6 298 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 DNAJC11Q9NVH1 559 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 TAS2R1Q9NYW7 299 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 COX16Q9P0S2 106 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 VPS28Q9UK41 221 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 NEU2Q9Y3R4 380 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 SAMHD1Q9Y3Z3 626 aaKnown RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 NSD3Q9BZ95 1437 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 XIRP1Q702N8 1843 aaKnown RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 SCAMP3O14828 347 aaKnown RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 GPX5O75715 221 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CNOT4O95628 575 aaKnown RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 WDPCPO95876 746 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CHMP24386 653 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 SPAM1P38567 509 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 PGDP52209 483 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 KCNQ4P56696 695 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 RAB4BP61018 213 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 PSMC6P62333 389 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 GLO1Q04760 184 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ST3GAL1Q11201 340 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ADAM15Q13444 863 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 DLGAP5Q15398 846 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 DLG2Q15700 870 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 DPYSL2Q16555 572 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 TKFCQ3LXA3 575 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 RPS26P11Q5JNZ5 115 aaPredicted RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF530Q6P9A1 599 aaPredicted RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 SYCE2Q6PIF2 218 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 BRAT1Q6PJG6 821 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 PLEKHG7Q6ZR37 379 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 USP49Q70CQ1 688 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 PDZD4Q76G19 769 aaPredicted RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 HDDC2Q7Z4H3 204 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 TIGD4Q8IY51 512 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ARL14Q8N4G2 192 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 RASGRP4Q8TDF6 673 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ATOH1Q92858 354 aaPredicted RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 SNAPC3Q92966 411 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 EXT2Q93063 718 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 RFKQ969G6 155 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 PURBQ96QR8 312 aaKnown RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 SLC25A23Q9BV35 468 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 EDEM2Q9BV94 578 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 MMP27Q9H306 513 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 SARS2Q9NP81 518 aaKnown RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CD163L1Q9NR16 1453 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 FAM92AA1XBS5 289 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 EFCAB7A8K855 629 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 NUDT19A8MXV4 375 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF487B1APH4 448 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 POTECB2RU33 542 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 PLD2O14939 933 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 SPAG7O75391 227 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 KLK3P07288 261 aaPredicted RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CYP2C18P33260 490 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 PUDPQ08623 228 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 PPIL2Q13356 520 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 GCKRQ14397 625 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ARHGAP19Q14CB8 494 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 SLC25A24Q6NUK1 477 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 DCUN1D2Q6PH85 259 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ATG14Q6ZNE5 492 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 AMIGO2Q86SJ2 522 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 TMC8Q8IU68 726 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ARMC8Q8IUR7 673 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 MCPH1Q8NEM0 835 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 EPS8L1Q8TE68 723 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 EXOSC8Q96B26 276 aaKnown RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 PGM2Q96G03 612 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 APOPT1Q96IL0 206 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 C7orf34Q96L11 122 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 LURAP1Q96LR2 239 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 C9orf72Q96LT7 481 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 NEU1Q99519 415 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF251Q9BRH9 671 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 MKNK1Q9BUB5 465 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 TRIM2Q9C040 744 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 OPN3Q9H1Y3 402 aaPredicted RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CAB39LQ9H9S4 337 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CPNE5Q9HCH3 593 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 NUDT15Q9NV35 164 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CHORDC1Q9UHD1 332 aaPredicted RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 REXO2Q9Y3B8 237 aaKnown RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ASB4Q9Y574 426 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 PCDHGA9Q9Y5G4 932 aaKnown RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CSADQ9Y600 493 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 NEDD4P46934 1319 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 A0A1W2PRG0 241 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ARHGAP42A6NI28 874 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 KBTBD13C9JR72 458 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 I3L521 148 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 EYA2O00167 538 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 ZBTB5O15062 677 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 KIAA0355O15063 1070 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 RFPL2O75678 378 aa7.8□□□□□ -1.16
GPNMB-201ENST00000258733 NDUFA10O95299 355 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms