RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 TAF13Q15543 124 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 TRIQKQ629K1 86 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 RGMBQ6NW40 437 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 MC4RP32245 332 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 MAGEA10P43363 369 aaPredicted RBP18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 CRYBB1P53674 252 aaPredicted RBP18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 BST1Q10588 318 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 ATAD1Q8NBU5 361 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 CLHC1Q8NHS4 586 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 PIWIL2Q8TC59 973 aaKnown RBP18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 IQCMA0A1B0GVH7 501 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 CCL16O15467 120 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 PRKCIP41743 596 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 WASHC2DQ5SRD0 308 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 LINGO1Q96FE5 620 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 PAGE1O75459 146 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 FAM155BO75949 473 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 FARP2O94887 1054 aaPredicted RBP18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 HGFP14210 728 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 NDUFV1P49821 464 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 EXOC3L1Q86VI1 746 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 XPR1Q9UBH6 696 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 SNX6Q9UNH7 406 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 PRKAB1Q9Y478 270 aa18.82■□□□□ 0.6
SMARCC1-201ENST00000254480 OR10H2O60403 315 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 CSH1P0DML2 217 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 CSH2P0DML3 217 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 USP4Q13107 963 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 AFTPHQ6ULP2 937 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 OTOP3Q7RTS5 596 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 PLPPR4Q7Z2D5 763 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 TEKT5Q96M29 485 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 BRD9Q9H8M2 597 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 IQCF5A8MTL0 148 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 PPP1R11O60927 126 aaPredicted RBP18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 RAB10P61026 200 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 TSNQ15631 228 aaKnown RBP18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 UROC1Q96N76 676 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 EPS8L2Q9H6S3 715 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 ANAPC2Q9UJX6 822 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 STARD13Q9Y3M8 1113 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 SLC25A14O95258 325 aaPredicted RBP18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 ITGA2BP08514 1039 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 PRKAA2P54646 552 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 C9orf57Q5W0N0 161 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 MAGEC3Q8TD91 643 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 SHC3Q92529 594 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 SMIM31A0A1B0GVY4 71 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 C2orf71A6NGG8 1288 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 VPS4BO75351 444 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 FAM187BQ17R55 369 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 KBTBD2Q8IY47 623 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 PGM2Q96G03 612 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 MRPL48Q96GC5 212 aaKnown RBP18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 BCL2L14Q9BZR8 327 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 ZNF624Q9P2J8 865 aaPredicted RBP18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 ZACNQ401N2 412 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 LINGO4Q6UY18 593 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 MAT2BQ9NZL9 334 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 EGFL7Q9UHF1 273 aa18.81■□□□□ 0.6
SMARCC1-201ENST00000254480 FFAR2O15552 330 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 PIK3R1P27986 724 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 PREPLQ4J6C6 727 aaPredicted RBP18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 LDB1Q86U70 411 aaPredicted RBP18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 HSD17B14Q9BPX1 270 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 MYRFQ9Y2G1 1151 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 OR10H1Q9Y4A9 318 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 KIDINS220Q9ULH0 1771 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 A0A1B0GW55 424 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 BCLAF3A2AJT9 711 aaKnown RBP18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 FOXO6A8MYZ6 492 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 TREHO43280 583 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 DUX4L2P0CJ85 424 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 DUX4L3P0CJ86 424 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 DUX4L4P0CJ87 422 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 DUX4L5P0CJ88 424 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 DUX4L6P0CJ89 424 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 DUX4L7P0CJ90 424 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 RFWD3Q6PCD5 774 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 NKAPQ8N5F7 415 aaKnown RBP18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 REXO5Q96IC2 774 aaKnown RBP18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 DUX4Q9UBX2 424 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 ULK1O75385 1050 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 NELFEP18615 380 aaKnown RBP18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 ZCCHC7Q8N3Z6 543 aaKnown RBP18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 CKAP2Q8WWK9 683 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 PCDHB18PQ96TA0 734 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 KCNK4Q9NYG8 393 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 ASF1AQ9Y294 204 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 TNPO3Q9Y5L0 923 aaKnown RBP18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 CABYRO75952 493 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 MATKP42679 507 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 ADRM1Q16186 407 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 MAPKAPK3Q16644 382 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 R3HCC1LQ7Z5L2 792 aaKnown RBP18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 EXO5Q9H790 373 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 SNX15Q9NRS6 342 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 CACNG4Q9UBN1 327 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 MTA1Q13330 715 aa18.8■□□□□ 0.6
SMARCC1-201ENST00000254480 MSLNQ13421 630 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms