RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 MPP3Q13368 585 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 TTC31Q49AM3 519 aaPredicted RBP14.25□□□□□ -0.13
VPS25-201ENST00000253794 ANO7Q6IWH7 933 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 BRAT1Q6PJG6 821 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 ARHGEF18Q6ZSZ5 1173 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 SYDE1Q6ZW31 735 aaPredicted RBP14.25□□□□□ -0.13
VPS25-201ENST00000253794 KBTBD6Q86V97 674 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 WDR5BQ86VZ2 330 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 RYBPQ8N488 228 aaPredicted RBP14.25□□□□□ -0.13
VPS25-201ENST00000253794 AADATQ8N5Z0 425 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 CCDC89Q8N998 374 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 GLIS1Q8NBF1 620 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 GRIN3AQ8TCU5 1115 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 HMGB4Q8WW32 186 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 OXNAD1Q96HP4 312 aaPredicted RBP14.25□□□□□ -0.13
VPS25-201ENST00000253794 TRIB3Q96RU7 358 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 LRFN3Q9BTN0 628 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 TDRD1Q9BXT4 1180 aaKnown RBP14.25□□□□□ -0.13
VPS25-201ENST00000253794 DDX47Q9H0S4 455 aaKnown RBP14.25□□□□□ -0.13
VPS25-201ENST00000253794 L2HGDHQ9H9P8 463 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 FAM153AQ9UHL3 310 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 RSPH14Q9UHP6 348 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 RPL26L1Q9UNX3 145 aaKnown RBP14.25□□□□□ -0.13
VPS25-201ENST00000253794 ARIH1Q9Y4X5 557 aaPredicted RBP14.25□□□□□ -0.13
VPS25-201ENST00000253794 CACNA1IQ9P0X4 2223 aa14.25□□□□□ -0.13
VPS25-201ENST00000253794 TTC24A2A3L6 582 aaPredicted RBP14.24□□□□□ -0.13
VPS25-201ENST00000253794 C16orf96A6NNT2 1141 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 MID1O15344 667 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 SLC7A4O43246 635 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 ZNF217O75362 1048 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 ANXA9O76027 345 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 PGLSO95336 258 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 PIGNO95427 931 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 GAS8O95995 478 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 EPOP01588 193 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 UGT2B4P06133 528 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 CA4P22748 312 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 PSMB4P28070 264 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 FDFT1P37268 417 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 CD86P42081 329 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 PTGIRP43119 386 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 ITKQ08881 620 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 CCDC15Q0P6D6 951 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 TRAF2Q12933 501 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 SEMA5AQ13591 1074 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 DHX34Q14147 1143 aaKnown RBP14.24□□□□□ -0.13
VPS25-201ENST00000253794 PIP5KL1Q5T9C9 394 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 KCTD11Q693B1 232 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 KDELC1Q6UW63 502 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 CAMK1DQ8IU85 385 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 RAB7BQ96AH8 199 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 ARRDC3Q96B67 414 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 KLHL32Q96NJ5 620 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 RBM15Q96T37 977 aaKnown RBP eCLIP14.24□□□□□ -0.13
VPS25-201ENST00000253794 SLC6A17Q9H1V8 727 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 AAR2Q9Y312 384 aaKnown RBP14.24□□□□□ -0.13
VPS25-201ENST00000253794 PPIL1Q9Y3C6 166 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 TTLL3Q9Y4R7 772 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 RAI2Q9Y5P3 530 aa14.24□□□□□ -0.13
VPS25-201ENST00000253794 LOC285095A0A1B0GVY8 99 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 ERI2A8K979 691 aaKnown RBP14.23□□□□□ -0.13
VPS25-201ENST00000253794 KPNA3O00505 521 aaPredicted RBP14.23□□□□□ -0.13
VPS25-201ENST00000253794 DLL1O00548 723 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 AXIN1O15169 862 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 AP1G1O43747 822 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 METTL18O95568 372 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 ECEL1O95672 775 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 PRLP01236 227 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 IFNB1P01574 187 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 ACADMP11310 421 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 OXTRP30559 389 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 RPL22P35268 128 aaKnown RBP14.23□□□□□ -0.13
VPS25-201ENST00000253794 ADRA1AP35348 466 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 ACTN2P35609 894 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 P2RY2P41231 377 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 MAGEA6P43360 314 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 TPMTP51580 245 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 NEK3P51956 506 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 METAP1P53582 386 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 GEMP55040 296 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 PTK6Q13882 451 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 PRPSAP1Q14558 356 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 ANGPT1Q15389 498 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 MAP7D1Q3KQU3 841 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 AGBL4Q5VU57 503 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 ERN2Q76MJ5 926 aaKnown RBP14.23□□□□□ -0.13
VPS25-201ENST00000253794 PARS2Q7L3T8 475 aaKnown RBP14.23□□□□□ -0.13
VPS25-201ENST00000253794 GSTA5Q7RTV2 222 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 LONP2Q86WA8 852 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 ZSWIM9Q86XI8 627 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 MNS1Q8NEH6 495 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 SPATA22Q8NHS9 363 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 CCHCR1Q8TD31 782 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 FEM1CQ96JP0 617 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 MRGPRX2Q96LB1 330 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 MLPHQ9BV36 600 aaPredicted RBP14.23□□□□□ -0.13
VPS25-201ENST00000253794 KDM4CQ9H3R0 1056 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 BCCIPQ9P287 314 aaKnown RBP eCLIP14.23□□□□□ -0.13
VPS25-201ENST00000253794 PCDHGC4Q9Y5F7 938 aa14.23□□□□□ -0.13
VPS25-201ENST00000253794 PLXND1Q9Y4D7 1925 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms