RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 FER1L6Q2WGJ9 1857 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 DDNO94850 711 aaPredicted RBP4.65□□□□□ -1.66
VPS13C-201ENST00000249837 SLC18A1P54219 525 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 LRRC74AQ0VAA2 488 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 TIGD2Q4W5G0 525 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 SLC39A12Q504Y0 691 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 FRMD7Q6ZUT3 714 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 FAM47BQ8NA70 645 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 CIB1Q99828 191 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 DGCR6LQ9BY27 220 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 CLPBQ9H078 707 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 IMPAD1Q9NX62 359 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 SCN3BQ9NY72 215 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 PNMA8BQ9ULN7 279 aaPredicted RBP4.65□□□□□ -1.66
VPS13C-201ENST00000249837 MYBPHLA2RUH7 354 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 FAM159BA6NKW6 160 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 F5H5T6 163 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 RAMP2O60895 175 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 EGFRP00533 1210 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 MLNP12872 115 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 MZF1P28698 734 aaPredicted RBP4.65□□□□□ -1.66
VPS13C-201ENST00000249837 CHRNA4P43681 627 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 RAB10P61026 200 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 SLC18A2Q05940 514 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 PIWIL4Q7Z3Z4 852 aaKnown RBP4.65□□□□□ -1.66
VPS13C-201ENST00000249837 CAND1Q86VP6 1230 aaKnown RBP4.65□□□□□ -1.66
VPS13C-201ENST00000249837 GPSM1Q86YR5 675 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 LGI2Q8N0V4 545 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 FAM81AQ8TBF8 368 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 FAM120BQ96EK7 910 aaKnown RBP4.65□□□□□ -1.66
VPS13C-201ENST00000249837 FAM50BQ9Y247 325 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 EIF3LQ9Y262 564 aaKnown RBP4.65□□□□□ -1.66
VPS13C-201ENST00000249837 USP54Q70EL1 1684 aa4.65□□□□□ -1.66
VPS13C-201ENST00000249837 DEAF1O75398 565 aaPredicted RBP4.65□□□□□ -1.67
VPS13C-201ENST00000249837 FKBP9O95302 570 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 SERPINF2P08697 491 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 OCM2P0CE71 109 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 OCMP0CE72 109 aaPredicted RBP4.65□□□□□ -1.67
VPS13C-201ENST00000249837 PCNAP12004 261 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 DLG1Q12959 904 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 FKBP9P1Q75LS8 142 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 ZNF410Q86VK4 478 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 MOCOSQ96EN8 888 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 SCHIP1Q9P0W5 487 aaPredicted RBP4.65□□□□□ -1.67
VPS13C-201ENST00000249837 FADS3Q9Y5Q0 445 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 CKAP5Q14008 2032 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 LOC100506127A0A0U1RQW1 187 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 YJEFN3A6XGL0 299 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 EVPLLA8MZ36 301 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 E7ENX8 843 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 CBX4O00257 560 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 FCGR1AP12314 374 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 NR4A1P22736 598 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 ASPAP45381 313 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 RAD23AP54725 363 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 C9orf131Q5VYM1 1079 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 LRRC8DQ7L1W4 858 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 HORMAD1Q86X24 394 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 OFCC1Q8IZS5 231 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 ZCCHC7Q8N3Z6 543 aaKnown RBP4.65□□□□□ -1.67
VPS13C-201ENST00000249837 WDTC1Q8N5D0 677 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 CDYL2Q8N8U2 506 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 SKA1Q96BD8 255 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 SIGLEC10Q96LC7 697 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 DUSP16Q9BY84 665 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 SYTL2Q9HCH5 934 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 MDM4O15151 490 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 MAN1A2O60476 641 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 STRADAQ7RTN6 431 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 PARP8Q8N3A8 854 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 GALNT15Q8N3T1 639 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 TTC30BQ8N4P2 665 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 NAT16Q8N8M0 369 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 ENDOVQ8N8Q3 282 aaKnown RBP4.65□□□□□ -1.67
VPS13C-201ENST00000249837 RNF39Q9H2S5 420 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 PNPLA3Q9NST1 481 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 COMMD8Q9NX08 183 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 POLG2Q9UHN1 485 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 ZNHIT2Q9UHR6 403 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 ZFC3H1O60293 1989 aaKnown RBP4.65□□□□□ -1.67
VPS13C-201ENST00000249837 TTC24A2A3L6 582 aaPredicted RBP4.65□□□□□ -1.67
VPS13C-201ENST00000249837 MT-CYBP00156 380 aaPredicted RBP4.65□□□□□ -1.67
VPS13C-201ENST00000249837 T-ENOLP0DO92 83 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 ICAM3P32942 547 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 SCNN1GP51170 649 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 CCR3P51677 355 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 THOP1P52888 689 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 XIAPP98170 497 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 CCNIQ14094 377 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 EXOC2Q96KP1 924 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 TCF12Q99081 682 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 FETUBQ9UGM5 382 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 SFMBT1Q9UHJ3 866 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 TIMM22Q9Y584 194 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 STYXL1Q9Y6J8 313 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 A8MX80 341 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 CCR10P46092 362 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 BRCC3P46736 316 aa4.65□□□□□ -1.67
VPS13C-201ENST00000249837 HARS2P49590 506 aaKnown RBP4.65□□□□□ -1.67
VPS13C-201ENST00000249837 CLCN5P51795 746 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms