RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 NCF1BA6NI72 391 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 NCF1CA8MVU1 366 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 SLCO1B7G3V0H7 640 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 SNUPNO95149 360 aaKnown RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 NCF1P14598 390 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 ATP5F1P24539 256 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 SLC5A3P53794 718 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 MAP2K5Q13163 448 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 CEACAM7Q14002 265 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 PCBP1Q15365 356 aaKnown RBP eCLIP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 PPP1R3AQ16821 1122 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 CNPY1Q3B7I2 92 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 FOXB2Q5VYV0 432 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 HDAC10Q969S8 669 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 NT5C3BQ969T7 300 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 CCDC68Q9H2F9 335 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 EML4Q9HC35 981 aaKnown RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 DNAJB4Q9UDY4 337 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 TTC3P53804 2025 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 DNAJA2O60884 412 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 MARC1Q5VT66 337 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 CIR1Q86X95 450 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 APLFQ8IW19 511 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 ADAM2Q99965 735 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 GORASP1Q9BQQ3 440 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 CAAP1Q9H8G2 361 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 SARS2Q9NP81 518 aaKnown RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 ENTPD7Q9NQZ7 604 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 FLRT1Q9NZU1 646 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 PSMD12O00232 456 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 NR5A2O00482 541 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 GRID2O43424 1007 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 OR1G1P47890 313 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 AIF1P55008 147 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 MS4A2Q01362 244 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 DSC2Q02487 901 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 GPR158Q5T848 1215 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 PIWIL4Q7Z3Z4 852 aaKnown RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 C14orf80Q86SX3 495 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 STYXQ8WUJ0 223 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 RPRD1AQ96P16 312 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 MRPL57Q9BQC6 102 aaKnown RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 TRPV2Q9Y5S1 764 aa12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 TRIP12Q14669 1992 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-201ENST00000247833 A0A1W2PQH9 124 aa12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 MBLAC1A4D2B0 266 aaPredicted RBP12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 LRPAP1P30533 357 aa12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 SATB1Q01826 763 aa12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 STX5Q13190 355 aa12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 MSLNQ13421 630 aaPredicted RBP12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 PTPRCAPQ14761 206 aa12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 CWF19L1Q69YN2 538 aaKnown RBP12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 TAF2Q6P1X5 1199 aa12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 PGM2L1Q6PCE3 622 aa12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 ZNF467Q7Z7K2 595 aaPredicted RBP12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 CUZD1Q86UP6 607 aa12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 FAM192AQ9GZU8 254 aa12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 GIMAP2Q9UG22 337 aa12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 PRPF19Q9UMS4 504 aaKnown RBP12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 GNEQ9Y223 722 aaKnown RBP12.71□□□□□ -0.37
RAB3IP-201ENST00000247833 GABRDO14764 452 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 MRASO14807 208 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 TSPAN3O60637 253 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 YWHAQP27348 245 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 YWHAHQ04917 246 aaPredicted RBP12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 ZNF235Q14590 738 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 LDLRAD1Q5T700 205 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 KCTD11Q693B1 232 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 PIM3Q86V86 326 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 NUP93Q8N1F7 819 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 GALNT15Q8N3T1 639 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 RDH11Q8TC12 318 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 PKP2Q99959 881 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 KIFC1Q9BW19 673 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 UPF3AQ9H1J1 476 aaKnown RBP12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 FBRSL1Q9HCM7 1045 aaKnown RBP12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 RGS18Q9NS28 235 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 KCTD3Q9Y597 815 aa12.71□□□□□ -0.38
RAB3IP-201ENST00000247833 GIPC1O14908 333 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 SRP72O76094 671 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 TBX18O95935 607 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 SERPINH1P50454 418 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 HUNKP57058 714 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 PSMD5Q16401 504 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 RAB44Q7Z6P3 723 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 PGAM4Q8N0Y7 254 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 CALML6Q8TD86 181 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 ZC3H15Q8WU90 426 aaKnown RBP12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 RMDN1Q96DB5 314 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 B3GALT6Q96L58 329 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 FAM193BQ96PV7 902 aaPredicted RBP12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 PIF1Q9H611 641 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 ABCC13Q9NSE7 274 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 RAD54BQ9Y620 910 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 MYADML2A6NDP7 307 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 E9PAM4 449 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 J3KR12 359 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 CLGNO14967 610 aa12.7□□□□□ -0.38
RAB3IP-201ENST00000247833 MATN3O15232 486 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms