RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 HLA-DPA1P20036 260 aa19.38■□□□□ 0.69
SBDS-201ENST00000246868 MAGEA3P43357 314 aa19.38■□□□□ 0.69
SBDS-201ENST00000246868 MAGEA4P43358 317 aa19.38■□□□□ 0.69
SBDS-201ENST00000246868 NPY2RP49146 381 aa19.38■□□□□ 0.69
SBDS-201ENST00000246868 CCNHP51946 323 aaPredicted RBP19.38■□□□□ 0.69
SBDS-201ENST00000246868 PMS2P54278 862 aa19.38■□□□□ 0.69
SBDS-201ENST00000246868 MTM1Q13496 603 aa19.38■□□□□ 0.69
SBDS-201ENST00000246868 OLIG2Q13516 323 aa19.38■□□□□ 0.69
SBDS-201ENST00000246868 DPY19L3Q6ZPD9 716 aa19.38■□□□□ 0.69
SBDS-201ENST00000246868 TRMT10CQ7L0Y3 403 aaKnown RBP19.38■□□□□ 0.69
SBDS-201ENST00000246868 RELL1Q8IUW5 271 aa19.38■□□□□ 0.69
SBDS-201ENST00000246868 SFTPA1Q8IWL2 248 aa19.38■□□□□ 0.69
SBDS-201ENST00000246868 PYROXD1Q8WU10 500 aa19.38■□□□□ 0.69
SBDS-201ENST00000246868 PDCD6IPQ8WUM4 868 aaKnown RBP19.38■□□□□ 0.69
SBDS-201ENST00000246868 TDRD1Q9BXT4 1180 aaKnown RBP19.38■□□□□ 0.69
SBDS-201ENST00000246868 CPEB1Q9BZB8 566 aaKnown RBP19.38■□□□□ 0.69
SBDS-201ENST00000246868 PIH1D1Q9NWS0 290 aaKnown RBP19.38■□□□□ 0.69
SBDS-201ENST00000246868 PCDHGC4Q9Y5F7 938 aa19.38■□□□□ 0.69
SBDS-201ENST00000246868 LOC285095A0A1B0GVY8 99 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 ALOX15BO15296 676 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 SOCS5O75159 536 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 NDST3O95803 873 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 CPP00450 1065 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 FGF1P05230 155 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 CBLBQ13191 982 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 IHHQ14623 411 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 SLC1A5Q15758 541 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 HNRNPA1L2Q32P51 320 aaKnown RBP19.37■□□□□ 0.69
SBDS-201ENST00000246868 MSS51Q4VC12 460 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 CCDC38Q502W7 563 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 SLC44A4Q53GD3 710 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 TMEM196Q5HYL7 178 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 EGFLAMQ63HQ2 1017 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 CASC4Q6P4E1 433 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 MREGQ8N565 214 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 SLC25A41Q8N5S1 370 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 ZNF513Q8N8E2 541 aaPredicted RBP19.37■□□□□ 0.69
SBDS-201ENST00000246868 OR2A12Q8NGT7 310 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 TTC25Q96NG3 672 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 IL22Q9GZX6 179 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 ZDHHC6Q9H6R6 413 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 ARNT2Q9HBZ2 717 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 SAMD15Q9P1V8 674 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 SUN2Q9UH99 717 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 SORCS3Q9UPU3 1222 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 CHKBQ9Y259 395 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 MAD1L1Q9Y6D9 718 aa19.37■□□□□ 0.69
SBDS-201ENST00000246868 WASH3PC4AMC7 463 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 HNRNPLP14866 589 aaKnown RBP eCLIP19.36■□□□□ 0.69
SBDS-201ENST00000246868 CFAP58Q5T655 872 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 ARMC12Q5T9G4 340 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 CHPFQ8IZ52 775 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 KCNV2Q8TDN2 545 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 RMDN1Q96DB5 314 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 HEPHQ9BQS7 1158 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 NAT9Q9BTE0 207 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 TMEM245Q9H330 911 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 K7EQS6 105 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 MAN2B1O00754 1011 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 BANF1O75531 89 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 MGAT1P26572 445 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 ELK3P41970 407 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 TRAF2Q12933 501 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 SIRPB2Q5JXA9 342 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 SPDYCQ5MJ68 293 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 HP1BP3Q5SSJ5 553 aaPredicted RBP19.36■□□□□ 0.69
SBDS-201ENST00000246868 TPRG1Q6ZUI0 275 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 CAMK1DQ8IU85 385 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 CCNJLQ8IV13 435 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 ANKMY2Q8IV38 441 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 ZNF366Q8N895 744 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 FBXO36Q8NEA4 188 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 UBLCP1Q8WVY7 318 aaPredicted RBP19.36■□□□□ 0.69
SBDS-201ENST00000246868 FAM3CQ92520 227 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 PTPRN2Q92932 1015 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 LRIG1Q96JA1 1093 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 C9orf72Q96LT7 481 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 ZNF641Q96N77 438 aaPredicted RBP19.36■□□□□ 0.69
SBDS-201ENST00000246868 TXLNGYQ9BZA5 131 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 CDC42EP4Q9H3Q1 356 aaKnown RBP19.36■□□□□ 0.69
SBDS-201ENST00000246868 CHMP2BQ9UQN3 213 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 PCDHB9Q9Y5E1 797 aa19.36■□□□□ 0.69
SBDS-201ENST00000246868 PIGNO95427 931 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 ALADP13716 330 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 HLA-EP13747 358 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 IL12RB1P42701 662 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 CHRNA4P43681 627 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 EPHB1P54762 984 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 SEC13P55735 322 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 RPL26P61254 145 aaKnown RBP19.35■□□□□ 0.69
SBDS-201ENST00000246868 GALNT3Q14435 633 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 FASTKD3Q14CZ7 662 aaKnown RBP19.35■□□□□ 0.69
SBDS-201ENST00000246868 DENND5AQ6IQ26 1287 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 SDE2Q6IQ49 451 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 FSTL4Q6MZW2 842 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 TRMT11Q7Z4G4 463 aaKnown RBP19.35■□□□□ 0.69
SBDS-201ENST00000246868 PALM2Q8IXS6 379 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 CHST14Q8NCH0 376 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 LPCAT1Q8NF37 534 aa19.35■□□□□ 0.69
SBDS-201ENST00000246868 ATXN2LQ8WWM7 1075 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms