RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 ADH1CP00326 375 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 C1QAP02745 245 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 SNRPAP09012 282 aaKnown RBP18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 ERVK-10P10266 1014 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 PABPC1P11940 636 aaKnown RBP18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 IGFBP4P22692 258 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 NMBRP28336 390 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 HLA-FP30511 346 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 SULT2A1Q06520 285 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 DMC1Q14565 340 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 PDPK2PQ6A1A2 396 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 MARK2Q7KZI7 788 aaKnown RBP18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 KCNMB4Q86W47 210 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 UNC5BQ8IZJ1 945 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 DEFB123Q8N688 67 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 RMDN1Q96DB5 314 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 MTBPQ96DY7 904 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 RANBP9Q96S59 729 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 ADGRE3Q9BY15 652 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 CCDC78A2IDD5 438 aa18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 MT-CO1P00395 513 aa18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 ALADP13716 330 aa18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 POU3F3P20264 500 aaPredicted RBP18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 CNTFP26441 200 aa18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 MDH1P40925 334 aaKnown RBP18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 MAPK8P45983 427 aa18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 DHCR24Q15392 516 aa18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 NLRP9Q7RTR0 991 aa18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 GABPB2Q8TAK5 448 aaPredicted RBP18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 OBP2AQ9NY56 170 aa18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 PSD3Q9NYI0 1048 aa18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 LHX3Q9UBR4 397 aa18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 PRKAG3Q9UGI9 489 aa18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 INTS6Q9UL03 887 aaKnown RBP18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 CHKBQ9Y259 395 aa18.9■□□□□ 0.62
TNFSF9-201ENST00000245817 FOXO6A8MYZ6 492 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 FAM155BO75949 473 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 ATXN1LP0C7T5 689 aaKnown RBP18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 ADH5P11766 374 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 AP1S1P61966 158 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 GNGT1P63211 74 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 PPARDQ03181 441 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 GALNT3Q14435 633 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 IHHQ14623 411 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 SYCE2Q6PIF2 218 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 NCEH1Q6PIU2 408 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 EP400NLQ6ZTU2 488 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 SRLQ86TD4 932 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 NAT16Q8N8M0 369 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 LMLNQ96KR4 655 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 CPNE1Q99829 537 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 NSMCE4AQ9NXX6 385 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 NKIRAS1Q9NYS0 192 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 CDH7Q9ULB5 785 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 RAI2Q9Y5P3 530 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 MTCH2Q9Y6C9 303 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 TMEM120BA0PK00 339 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 HEPACAM2A8MVW5 462 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 K7ERQ8 282 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 NFATC1O95644 943 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 KRT4P19013 534 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 ADAM15Q13444 863 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 THOC5Q13769 683 aaKnown RBP18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 ADGRE1Q14246 886 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 TERF2Q15554 542 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 FUT11Q495W5 492 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 HSP90AA5PQ58FG0 334 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 AHI1Q8N157 1196 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 PAF1Q8N7H5 531 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 BLOC1S5Q8TDH9 187 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 PDCD6IPQ8WUM4 868 aaKnown RBP18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 E2F7Q96AV8 911 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 ALKBH8Q96BT7 664 aaKnown RBP18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 LRRC3BQ96PB8 259 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 TDRD1Q9BXT4 1180 aaKnown RBP18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 TM6SF2Q9BZW4 377 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 ZFP14Q9HCL3 533 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 INTS9Q9NV88 658 aaKnown RBP18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 IL1RAPL1Q9NZN1 696 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 SMG5Q9UPR3 1016 aaKnown RBP18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 PCDHGC4Q9Y5F7 938 aa18.89■□□□□ 0.61
TNFSF9-201ENST00000245817 A0A1W2PPM1 405 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 TRIM49D1C9J1S8 452 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 UGT1A9O60656 530 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 IGSF6O95976 241 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 CHN1P15882 459 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 POLR2EP19388 210 aaKnown RBP18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 GP5P40197 560 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 GUCY1A3Q02108 690 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 SMAD1Q15797 465 aaKnown RBP18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 EML3Q32P44 896 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 ACCSLQ4AC99 568 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 ATXN7L2Q5T6C5 722 aaPredicted RBP18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 GRTP1Q5TC63 336 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 TTC19Q6DKK2 380 aaPredicted RBP18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 ESRP1Q6NXG1 681 aaKnown RBP18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 MDM1Q8TC05 714 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 ATP2A3Q93084 1043 aa18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 RPL10LQ96L21 214 aaKnown RBP18.88■□□□□ 0.61
TNFSF9-201ENST00000245817 ZNF778Q96MU6 729 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms