RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ZNF407Q9C0G0 2248 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 TCF4P15884 667 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 MPP1Q00013 466 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 RASAL3Q86YV0 1011 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 LZTR1Q8N653 840 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 GMCL1Q96IK5 515 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 OSBPL6Q9BZF3 934 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 AP2A2O94973 939 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 CRTAMO95727 393 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 CST1P01037 141 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 CYBBP04839 570 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 MTHFD1P11586 935 aaKnown RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 SREBF1P36956 1147 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 RNF144AP50876 292 aaPredicted RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 OLIG2Q13516 323 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 BLMHQ13867 455 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 ACE2Q9BYF1 805 aaPredicted RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 CLK4Q9HAZ1 481 aaKnown RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 MAT2BQ9NZL9 334 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 PPM1HQ9ULR3 514 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 AAR2Q9Y312 384 aaKnown RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 H3BMM5 538 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 ITGA2BP08514 1039 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 POU2F1P14859 743 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 LGALS3BPQ08380 585 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 USP39Q53GS9 565 aaKnown RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 KCTD8Q6ZWB6 473 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 OTOP1Q7RTM1 612 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 C16orf62Q7Z3J2 963 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 YTHDF3Q7Z739 585 aaKnown RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 PSD4Q8NDX1 1056 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 ARMC5Q96C12 935 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 TNKS2Q9H2K2 1166 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 MPP6Q9NZW5 540 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 PCYOX1Q9UHG3 505 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 FARP1Q9Y4F1 1045 aaPredicted RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 CLTBP09497 229 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 ZFP69Q49AA0 526 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 IER5Q5VY09 327 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 CNSTQ6PJW8 725 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 CIR1Q86X95 450 aaPredicted RBP7.58□□□□□ -1.2
RIF1-201ENST00000243326 LPPQ93052 612 aa7.58□□□□□ -1.2
RIF1-201ENST00000243326 PIK3C2BO00750 1634 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 MSI1O43347 362 aaKnown RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 GSAPA4D1B5 854 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 NCANO14594 1321 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 FFAR2O15552 330 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 CLIC3O95833 236 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 IL6P05231 212 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 PBX1P40424 430 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 DDR1Q08345 913 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 PGM5Q15124 567 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 VPS26BQ4G0F5 336 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 TRIM40Q6P9F5 258 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 PIWIL2Q8TC59 973 aaKnown RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 MYOCQ99972 504 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 RIOX1Q9H6W3 641 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 ADGRE2Q9UHX3 823 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 TRMUO75648 421 aaKnown RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 METTL18O95568 372 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 GDF10P55107 478 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 SH3D19Q5HYK7 790 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 RAP1GAP2Q684P5 730 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 ZNF613Q6PF04 617 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 DEF8Q6ZN54 512 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 KATNAL2Q8IYT4 538 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 NXNL1Q96CM4 212 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 TIPINQ9BVW5 301 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 REEP1Q9H902 201 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 MED12Q93074 2177 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 RHOCP08134 193 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 KRT20P35900 424 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 RARRES1P49788 294 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 ATXN1P54253 815 aaKnown RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 SLC20A2Q08357 652 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 ABRQ12979 859 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 ZNF781Q8N8C0 355 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 ATP6V0D2Q8N8Y2 350 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 MDM4O15151 490 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 CRY1Q16526 586 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 STYK1Q6J9G0 422 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 PIK3C3Q8NEB9 887 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 PIH1D2Q8WWB5 315 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 AGAP2Q99490 1192 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 PPCSQ9HAB8 311 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 RPTORQ8N122 1335 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 CHRNGP07510 517 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 TSNQ15631 228 aaKnown RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 FAM151BQ6UXP7 276 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 TRMT11Q7Z4G4 463 aaKnown RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 APOL4Q9BPW4 351 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 PTGFRNQ9P2B2 879 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 DMTF1Q9Y222 760 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 MFHAS1Q9Y4C4 1052 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 CHURC1-FNTBB4DL54 471 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 ITM2AO43736 263 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 SNRPB2P08579 225 aaKnown RBP7.57□□□□□ -1.2
RIF1-201ENST00000243326 CAP2P40123 477 aa7.57□□□□□ -1.2
RIF1-201ENST00000243326 BNIP1Q12981 228 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms