RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 POU6F1Q14863 301 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 HNRNPA1L2Q32P51 320 aaKnown RBP11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 LGSNQ5TDP6 509 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 GLT6D1Q7Z4J2 308 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 SDCCAG8Q86SQ7 713 aaPredicted RBP11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 LRIG1Q96JA1 1093 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 FEM1CQ96JP0 617 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 ACE2Q9BYF1 805 aaPredicted RBP11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 FBRSQ9HAH7 460 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 NOD2Q9HC29 1040 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 TLDC2A0PJX2 215 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 LRRC72A6NJI9 287 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 SIN3BO75182 1162 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 ASMTLO95671 621 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 NDST3O95803 873 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 FGF1P05230 155 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 GALNT3Q14435 633 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 TAOK1Q7L7X3 1001 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 SLC2A4RGQ9NR83 387 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 FBXL12Q9NXK8 326 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 ADH1BP00325 375 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 MYZAPP0CAP1 466 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 VAV1P15498 845 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 ABL2P42684 1182 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 GDF10P55107 478 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 EIF4EBP2Q13542 120 aaPredicted RBP11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 CYP1B1Q16678 543 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 HSF5Q4G112 596 aaPredicted RBP11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 KCNV2Q8TDN2 545 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 TRPV5Q9NQA5 729 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 RAB23Q9ULC3 237 aa11.24□□□□□ -0.61
TNFAIP3-201ENST00000237289 WASH3PC4AMC7 463 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 POLBP06746 335 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 CXCL12P48061 93 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 NPY2RP49146 381 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 ARF5P84085 180 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 TMPRSS15P98073 1019 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 NSUN2Q08J23 767 aaKnown RBP eCLIP11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 TAZQ16635 292 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 TTC27Q6P3X3 843 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 ZNF449Q6P9G9 518 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 BRAT1Q6PJG6 821 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 PIH1D1Q9NWS0 290 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 PKD2L2Q9NZM6 624 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 THAP10Q9P2Z0 257 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 ZC3H7BQ9UGR2 993 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 C1orf232A0A0U1RR37 186 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 TTC24A2A3L6 582 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 SMIM23A6NLE4 172 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 PRRT4C9JH25 899 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 GFRA2O00451 464 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 SMAD6O43541 496 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 LEFTY1O75610 366 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 OASLQ15646 514 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 OR52K1Q8NGK4 314 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 OR2T3Q8NH03 318 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 TTC17Q96AE7 1141 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 STAMBPL1Q96FJ0 436 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 HERPUD2Q9BSE4 406 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 FOXQ1Q9C009 403 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 HS3ST2Q9Y278 367 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 ACTL7AQ9Y615 435 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 PIGNO95427 931 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 ELFN1P0C7U0 828 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 IL12RB1P42701 662 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 NEK3P51956 506 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 COL19A1Q14993 1142 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 NLRP9Q7RTR0 991 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 ANKMY2Q8IV38 441 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 SYNPOQ8N3V7 929 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 UHMK1Q8TAS1 419 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 ISG20Q96AZ6 181 aaKnown RBP11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 DCUN1D1Q96GG9 259 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 NECAB3Q96P71 396 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 OLFM3Q96PB7 478 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 TUBGCP5Q96RT8 1024 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 MTG2Q9H4K7 406 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 LTB4R2Q9NPC1 389 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 PHTF1Q9UMS5 762 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 HEATR9A2RTY3 570 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 LOC730098B7Z3J9 87 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 CYTH1Q15438 398 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 ZNF641Q96N77 438 aaPredicted RBP11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 NAT9Q9BTE0 207 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 FAM129AQ9BZQ8 928 aa11.23□□□□□ -0.61
TNFAIP3-201ENST00000237289 ZNF638Q14966 1978 aaKnown RBP11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 AGTP01019 485 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 PIRTP0C851 137 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 GKP32189 559 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 NRLP54845 237 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 USP39Q53GS9 565 aaKnown RBP11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 ZRANB3Q5FWF4 1079 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 RIN3Q8TB24 985 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 SKA1Q96BD8 255 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 ZNF669Q96BR6 464 aaPredicted RBP11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 IL12RB2Q99665 862 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 BTBD1Q9H0C5 482 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 CRLS1Q9UJA2 301 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 CHMP2BQ9UQN3 213 aa11.22□□□□□ -0.61
TNFAIP3-201ENST00000237289 MAGEB16A2A368 324 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms