RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ZNF568Q3ZCX4 644 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 DGKKQ5KSL6 1271 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 GPAT2Q6NUI2 795 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 MZT2AQ6P582 158 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 TMPRSS11AQ6ZMR5 421 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 ARHGAP36Q6ZRI8 547 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 SNX19Q92543 992 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 AP3S1Q92572 193 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 SETDB2Q96T68 719 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 CYP4F12Q9HCS2 524 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 USP17L10C9JJH3 530 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 VPS4BO75351 444 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 CNPP09543 421 aaKnown RBP12.97□□□□□ -0.33
VAMP4-201ENST00000236192 GPD1P21695 349 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 UQCRC1P31930 480 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 HARS2P49590 506 aaKnown RBP12.97□□□□□ -0.33
VAMP4-201ENST00000236192 SRP54P61011 504 aaKnown RBP12.97□□□□□ -0.33
VAMP4-201ENST00000236192 PTP4A2Q12974 167 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 LSM12Q3MHD2 195 aaKnown RBP12.97□□□□□ -0.33
VAMP4-201ENST00000236192 ERMP1Q7Z2K6 904 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 SEMA4DQ92854 862 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 TTYH1Q9H313 450 aaPredicted RBP12.97□□□□□ -0.33
VAMP4-201ENST00000236192 TMLHEQ9NVH6 421 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 PCDHB12Q9Y5F1 795 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 TNRQ92752 1358 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 AQP12BA6NM10 295 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 EML1O00423 815 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 IL1BP01584 269 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 M6PRP20645 277 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 ALDH7A1P49419 539 aaKnown RBP12.97□□□□□ -0.33
VAMP4-201ENST00000236192 GDI2P50395 445 aaKnown RBP12.97□□□□□ -0.33
VAMP4-201ENST00000236192 HSF2Q03933 536 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 SLC13A2Q13183 592 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 AQP12AQ8IXF9 295 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 GALNT11Q8NCW6 608 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 OR5H6Q8NGV6 325 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 ANKRD60Q9BZ19 345 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 ZNF518BQ9C0D4 1074 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 RERGLQ9H628 205 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 ACP6Q9NPH0 428 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 FANCFQ9NPI8 374 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 PLK4O00444 970 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 EXTL3O43909 919 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 PGLSO95336 258 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 MT-CO1P00395 513 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 IFNA14P01570 189 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 RPLP0P05388 317 aaKnown RBP12.97□□□□□ -0.33
VAMP4-201ENST00000236192 HLCSP50747 726 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 NAGLUP54802 743 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 RHBDL3P58872 404 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 FMO1Q01740 532 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 BST2Q10589 180 aaKnown RBP12.97□□□□□ -0.33
VAMP4-201ENST00000236192 CNSTQ6PJW8 725 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 ZNF720Q7Z2F6 126 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 FAM71AQ8IYT1 594 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 ABRAQ8N0Z2 381 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 RNASE11Q8TAA1 199 aaKnown RBP12.97□□□□□ -0.33
VAMP4-201ENST00000236192 CCDC17Q96LX7 622 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 GAD1Q99259 594 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 TAS2R9Q9NYW1 312 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 DFFAO00273 331 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 BCKDKO14874 412 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 OR2B3O76000 313 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 PTPN2P17706 415 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 POLR2CP19387 275 aaPredicted RBP12.97□□□□□ -0.33
VAMP4-201ENST00000236192 CD40LGP29965 261 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 CUL2Q13617 745 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 INO80DQ53TQ3 878 aaPredicted RBP12.97□□□□□ -0.33
VAMP4-201ENST00000236192 CLVS2Q5SYC1 327 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 PHF11Q9UIL8 331 aa12.97□□□□□ -0.33
VAMP4-201ENST00000236192 hCG_1818297A0A087WSY0 165 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 FAM92AA1XBS5 289 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 C7P10643 843 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 ANKRD52Q8NB46 1076 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 OTUB1Q96FW1 271 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-201ENST00000236192 FBXL20Q96IG2 436 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 GON7Q9BXV9 100 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 PCDHAC1Q9H158 963 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 RETREG1Q9H6L5 497 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 COQ3Q9NZJ6 369 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 ATP6V1G2-DDX39BF2Z307 99 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 SULT1B1O43704 296 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 IL2RBP14784 551 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 MYF6P23409 242 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 INTS11Q5TA45 600 aaKnown RBP12.96□□□□□ -0.33
VAMP4-201ENST00000236192 CACHD1Q5VU97 1274 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 CPT1BQ92523 772 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 FCGR1BQ92637 280 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 RBAKQ9NYW8 714 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-201ENST00000236192 ACTR3BQ9P1U1 418 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 C3orf70A6NLC5 250 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-201ENST00000236192 LSM8O95777 96 aaKnown RBP12.96□□□□□ -0.33
VAMP4-201ENST00000236192 ZNF682O95780 498 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 MBL2P11226 248 aaPredicted RBP12.96□□□□□ -0.33
VAMP4-201ENST00000236192 DCKP27707 260 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 SWI5Q1ZZU3 235 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 NKX2-3Q8TAU0 364 aa12.96□□□□□ -0.33
VAMP4-201ENST00000236192 HDAC10Q969S8 669 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms