RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CATSPERZQ9NTU4 200 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 PTBP2Q9UKA9 531 aaKnown RBP8.28□□□□□ -1.08
APOB-201ENST00000233242 A8MUI8 341 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 RPN2P04844 631 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 AP1S2P56377 157 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 RAB2AP61019 212 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 SLC9A4Q6AI14 798 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 SPATA19Q7Z5L4 167 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 ADAMTSL2Q86TH1 951 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 ARMC8Q8IUR7 673 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 MAP4K3Q8IVH8 894 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 MEIOBQ8N635 442 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 RHOJQ9H4E5 214 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 CAB39LQ9H9S4 337 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 SNX15Q9NRS6 342 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 HPGDP15428 266 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 PIH1D2Q8WWB5 315 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 NACC2Q96BF6 587 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 FBXO44Q9H4M3 255 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 ZNF224Q9NZL3 707 aa8.28□□□□□ -1.08
APOB-201ENST00000233242 KLHL33A6NCF5 533 aa8.27□□□□□ -1.08
APOB-201ENST00000233242 EPB42P16452 691 aa8.27□□□□□ -1.08
APOB-201ENST00000233242 LPCAT4Q643R3 524 aa8.27□□□□□ -1.08
APOB-201ENST00000233242 XKRXQ6PP77 449 aa8.27□□□□□ -1.08
APOB-201ENST00000233242 NKD2Q969F2 451 aaPredicted RBP8.27□□□□□ -1.08
APOB-201ENST00000233242 SERPINB11Q96P15 392 aa8.27□□□□□ -1.08
APOB-201ENST00000233242 FAM126AQ9BYI3 521 aaPredicted RBP8.27□□□□□ -1.08
APOB-201ENST00000233242 MARCH7Q9H992 704 aa8.27□□□□□ -1.08
APOB-201ENST00000233242 RAMP2O60895 175 aa8.27□□□□□ -1.08
APOB-201ENST00000233242 TRUB2O95900 331 aaKnown RBP8.27□□□□□ -1.08
APOB-201ENST00000233242 ASS1P00966 412 aaKnown RBP8.27□□□□□ -1.08
APOB-201ENST00000233242 ECT2LQ008S8 904 aa8.27□□□□□ -1.08
APOB-201ENST00000233242 ADGRD1Q6QNK2 874 aa8.27□□□□□ -1.08
APOB-201ENST00000233242 USP43Q70EL4 1123 aa8.27□□□□□ -1.08
APOB-201ENST00000233242 R3HCC1LQ7Z5L2 792 aaKnown RBP8.27□□□□□ -1.08
APOB-201ENST00000233242 ALG3Q92685 438 aa8.27□□□□□ -1.08
APOB-201ENST00000233242 MTMR9Q96QG7 549 aa8.27□□□□□ -1.08
APOB-201ENST00000233242 RAD18Q9NS91 495 aa8.27□□□□□ -1.08
APOB-201ENST00000233242 A0A0G2JPF8 293 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 OR14I1A6ND48 311 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 HNRNPCL3B7ZW38 293 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 SERPINB7O75635 380 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 HNRNPCL4P0DMR1 293 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 LSM3P62310 102 aaKnown RBP8.27□□□□□ -1.09
APOB-201ENST00000233242 FAM151AQ8WW52 585 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 NEK6Q9HC98 313 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 PTGFRNQ9P2B2 879 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 TSPAN16Q9UKR8 245 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 KHDRBS3O75525 346 aaKnown RBP8.27□□□□□ -1.09
APOB-201ENST00000233242 PEX2P28328 305 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 RBL1P28749 1068 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 PHC1P78364 1004 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 UNC5AQ6ZN44 842 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 C10orf107Q8IVU9 208 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 NXNL1Q96CM4 212 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 YME1L1Q96TA2 773 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 SLC28A1O00337 649 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 SLC25A24Q6NUK1 477 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 C16orf46Q6P387 395 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 TRIM40Q6P9F5 258 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 VN1R5Q7Z5H4 357 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 C11orf96Q7Z7L8 435 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 SYT12Q8IV01 421 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 NODALQ96S42 347 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 SEPT5Q99719 369 aaPredicted RBP8.27□□□□□ -1.09
APOB-201ENST00000233242 MLXQ9UH92 298 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 A0A0X1KG70 313 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 ZMPSTE24O75844 475 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 EPHA3P29320 983 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 DNAJB14Q8TBM8 379 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 ERMAPQ96PL5 475 aaPredicted RBP8.27□□□□□ -1.09
APOB-201ENST00000233242 SMAD5Q99717 465 aaKnown RBP8.27□□□□□ -1.09
APOB-201ENST00000233242 CADM1Q9BY67 442 aaKnown RBP8.27□□□□□ -1.09
APOB-201ENST00000233242 MICAL2O94851 1124 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 CYP3A4P08684 503 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 PTX3P26022 381 aaPredicted RBP8.27□□□□□ -1.09
APOB-201ENST00000233242 STX12Q86Y82 276 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 DIRAS2Q96HU8 199 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 HIPK3Q9H422 1215 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 CYB561D2O14569 222 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 HMBSP08397 361 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 TTPAP49638 278 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 FBXO47Q5MNV8 452 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 OR2T12Q8NG77 320 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 GPRC5CQ9NQ84 441 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 TAS2R14Q9NYV8 317 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 E7ENX8 843 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 F8VP50 259 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 PEPDP12955 493 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 RFTN2Q52LD8 501 aaPredicted RBP8.27□□□□□ -1.09
APOB-201ENST00000233242 DDI2Q5TDH0 399 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 DNAJB7Q7Z6W7 309 aaPredicted RBP8.27□□□□□ -1.09
APOB-201ENST00000233242 PTGR2Q8N8N7 351 aaPredicted RBP8.27□□□□□ -1.09
APOB-201ENST00000233242 GSDMCQ9BYG8 508 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 KAT8Q9H7Z6 458 aaKnown RBP8.27□□□□□ -1.09
APOB-201ENST00000233242 MAN2B2Q9Y2E5 1009 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 PGK1P00558 417 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 CHKAP35790 457 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 MMP14P50281 582 aa8.27□□□□□ -1.09
APOB-201ENST00000233242 TKTL1P51854 596 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms