RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 CHD8Q9HCK8 2581 aa14.39□□□□□ -0.11
GPN3-201ENST00000228827 FAM149AA5PLN7 773 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 FFAR2O15552 330 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 BUB1BO60566 1050 aaPredicted RBP14.38□□□□□ -0.11
GPN3-201ENST00000228827 RARAP10276 462 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 EIF4A3P38919 411 aaKnown RBP14.38□□□□□ -0.11
GPN3-201ENST00000228827 ARL4AP40617 200 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 HCAR3P49019 387 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 CLDN6P56747 220 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 DPYSL2Q16555 572 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 BOLA3Q53S33 107 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 CFAP58Q5T655 872 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 KYAT3Q6YP21 454 aaKnown RBP14.38□□□□□ -0.11
GPN3-201ENST00000228827 CCNI2Q6ZMN8 369 aaPredicted RBP14.38□□□□□ -0.11
GPN3-201ENST00000228827 TMPRSS7Q7RTY8 843 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 CAMK1DQ8IU85 385 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 KDF1Q8NAX2 398 aaPredicted RBP14.38□□□□□ -0.11
GPN3-201ENST00000228827 TSEN2Q8NCE0 465 aaKnown RBP14.38□□□□□ -0.11
GPN3-201ENST00000228827 RNF214Q8ND24 703 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 KLF6Q99612 283 aaPredicted RBP14.38□□□□□ -0.11
GPN3-201ENST00000228827 TSPY26PQ9H489 355 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 SUV39H2Q9H5I1 410 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 DNAJC28Q9NX36 388 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 DKK3Q9UBP4 350 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 IPO11Q9UI26 975 aaKnown RBP14.38□□□□□ -0.11
GPN3-201ENST00000228827 ACACBO00763 2458 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 CEP295Q9C0D2 2601 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 TMEM8BA6NDV4 472 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 TRIM38O00635 465 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 CBFA2T2O43439 604 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 PRKCGP05129 697 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 DGKAP23743 735 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 GJC1P36383 396 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 RABIFP47224 123 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 ZNF135P52742 658 aaPredicted RBP14.38□□□□□ -0.11
GPN3-201ENST00000228827 SEMG2Q02383 582 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 PDE1CQ14123 709 aaPredicted RBP14.38□□□□□ -0.11
GPN3-201ENST00000228827 POLNQ7Z5Q5 900 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 SRLQ86TD4 932 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 ZSCAN30Q86W11 494 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 SLC25A45Q8N413 288 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 FAM174AQ8TBP5 190 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 LENG8Q96PV6 779 aaPredicted RBP14.38□□□□□ -0.11
GPN3-201ENST00000228827 CSPG4P5Q96PW8 444 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 PCDH18Q9HCL0 1135 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 COQ6Q9Y2Z9 468 aa14.38□□□□□ -0.11
GPN3-201ENST00000228827 MYO1FO00160 1098 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 MUSKO15146 869 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 SIGLEC6O43699 453 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 RFPL3O75679 317 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 PIAS2O75928 621 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 TM7SF2O76062 418 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 ACADVLP49748 655 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 SLC25A11Q02978 314 aaKnown RBP14.37□□□□□ -0.11
GPN3-201ENST00000228827 IL10RBQ08334 325 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 FZD2Q14332 565 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 KRT81Q14533 505 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 TPRG1LQ5T0D9 272 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 SPECC1LQ69YQ0 1117 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 TMCO3Q6UWJ1 677 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 CPNE8Q86YQ8 564 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 LZTR1Q8N653 840 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 PAF1Q8N7H5 531 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 NIPA2Q8N8Q9 360 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 ZNF564Q8TBZ8 553 aaPredicted RBP14.37□□□□□ -0.11
GPN3-201ENST00000228827 PACSIN1Q9BY11 444 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 PCDH12Q9NPG4 1184 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 CTTNBP2NLQ9P2B4 639 aa14.37□□□□□ -0.11
GPN3-201ENST00000228827 AKAP13Q12802 2813 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 ASPMQ8IZT6 3477 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 SPTY2D1-AS1A0A0U1RR47 76 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 TTC24A2A3L6 582 aaPredicted RBP14.36□□□□□ -0.11
GPN3-201ENST00000228827 IGFALSP35858 605 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 SCNN1BP51168 640 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 CDH6P55285 790 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 ELP6Q0PNE2 266 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 RFTN1Q14699 578 aaPredicted RBP14.36□□□□□ -0.11
GPN3-201ENST00000228827 LBRQ14739 615 aaKnown RBP14.36□□□□□ -0.11
GPN3-201ENST00000228827 GRM3Q14832 879 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 UGP2Q16851 508 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 TMEM52BQ4KMG9 183 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 HS1BP3Q53T59 392 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 ZSWIM9Q86XI8 627 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 DCP2Q8IU60 420 aaKnown RBP14.36□□□□□ -0.11
GPN3-201ENST00000228827 GALNT15Q8N3T1 639 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 DENND6BQ8NEG7 585 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 TEKT4Q8WW24 435 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 ASB12Q8WXK4 309 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 TSC1Q92574 1164 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 CENPTQ96BT3 561 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 TUBGCP5Q96RT8 1024 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 DEF6Q9H4E7 631 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 ATP13A3Q9H7F0 1226 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 MBNL1Q9NR56 388 aaKnown RBP14.36□□□□□ -0.11
GPN3-201ENST00000228827 GPR27Q9NS67 375 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 NENFQ9UMX5 172 aa14.36□□□□□ -0.11
GPN3-201ENST00000228827 SPEGQ15772 3267 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 TSPAN11A1L157 253 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 NEBLO76041 1014 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 CD48P09326 243 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms