RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 GKP32189 559 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 CDH5P33151 784 aaPredicted RBP11.74□□□□□ -0.53
FRG1-201ENST00000226798 CLCN1P35523 988 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 FLT3P36888 993 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 GABRB2P47870 512 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 DNA2P51530 1060 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 RNASE9P60153 205 aaKnown RBP11.74□□□□□ -0.53
FRG1-201ENST00000226798 YPEL5P62699 121 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 PTK2Q05397 1052 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 NFATC3Q12968 1075 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 C1orf61Q13536 156 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 LINC00303Q3SY05 128 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 TRNP1Q6NT89 227 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 ARL10Q8N8L6 244 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 KYQ8NBH2 561 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 OR6K2Q8NGY2 324 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 ARHGEF26Q96DR7 871 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 SLC13A1Q9BZW2 595 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 SIX2Q9NPC8 291 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 PLCB1Q9NQ66 1216 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 STARD5Q9NSY2 213 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 PPARGC1AQ9UBK2 798 aaKnown RBP11.74□□□□□ -0.53
FRG1-201ENST00000226798 RABGEF1Q9UJ41 708 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 PADI4Q9UM07 663 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 VPS9D1Q9Y2B5 631 aa11.74□□□□□ -0.53
FRG1-201ENST00000226798 USP9XQ93008 2570 aaPredicted RBP11.74□□□□□ -0.53
FRG1-201ENST00000226798 NBASA2RRP1 2371 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 GTPBP10A4D1E9 387 aaKnown RBP11.73□□□□□ -0.53
FRG1-201ENST00000226798 NEMP1O14524 444 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 TOR1BO14657 336 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 SRGAP2O75044 1071 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 GSRP00390 522 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 ITGB2P05107 769 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 UGT2B4P06133 528 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 PNMA6AP0CW24 399 aaPredicted RBP11.73□□□□□ -0.53
FRG1-201ENST00000226798 PON1P27169 355 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 SLC5A2P31639 672 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 CCKBRP32239 447 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 UGT1A5P35504 534 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 KRT9P35527 623 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 ACVRL1P37023 503 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 EXOC3L4Q17RC7 722 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 FAM102AQ5T9C2 384 aaPredicted RBP11.73□□□□□ -0.53
FRG1-201ENST00000226798 MANEALQ5VSG8 457 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 ESRP1Q6NXG1 681 aaKnown RBP11.73□□□□□ -0.53
FRG1-201ENST00000226798 XKR5Q6UX68 686 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 GBP6Q6ZN66 633 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 RAB11FIP2Q7L804 512 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 VPS36Q86VN1 386 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 XYLT1Q86Y38 959 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 DRC7Q8IY82 874 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 TP53I13Q8NBR0 393 aaPredicted RBP11.73□□□□□ -0.53
FRG1-201ENST00000226798 OR2AP1Q8NGE2 309 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 ARHGEF2Q92974 986 aaKnown RBP11.73□□□□□ -0.53
FRG1-201ENST00000226798 SGF29Q96ES7 293 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 OSBPL1AQ9BXW6 950 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 SYNDIG1Q9H7V2 258 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 MBNL1Q9NR56 388 aaKnown RBP11.73□□□□□ -0.53
FRG1-201ENST00000226798 NDFIP2Q9NV92 336 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 IL17BQ9UHF5 180 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 NEU3Q9UQ49 428 aa11.73□□□□□ -0.53
FRG1-201ENST00000226798 A0A1W2PQM1 296 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 BIN1O00499 593 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 KRIT1O00522 736 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 ITGB6P18564 788 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 ETFBP38117 255 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 EIF4A3P38919 411 aaKnown RBP11.72□□□□□ -0.53
FRG1-201ENST00000226798 GEMIN4P57678 1058 aaKnown RBP11.72□□□□□ -0.53
FRG1-201ENST00000226798 NRG1Q02297 640 aaPredicted RBP11.72□□□□□ -0.53
FRG1-201ENST00000226798 PPARDQ03181 441 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 SRSF6Q13247 344 aaKnown RBP11.72□□□□□ -0.53
FRG1-201ENST00000226798 TGIF1Q15583 401 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 LRRC73Q5JTD7 316 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 FAXCQ5TGI0 409 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 LVRNQ6Q4G3 990 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 NLRP14Q86W24 1093 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 FAM131BQ86XD5 332 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 FAM71AQ8IYT1 594 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 FSTL5Q8N475 847 aaPredicted RBP11.72□□□□□ -0.53
FRG1-201ENST00000226798 FBXO39Q8N4B4 442 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 PCDH19Q8TAB3 1148 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 CCDC74AQ96AQ1 378 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 KLHL32Q96NJ5 620 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 GFM1Q96RP9 751 aaKnown RBP11.72□□□□□ -0.53
FRG1-201ENST00000226798 EPAS1Q99814 870 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 FOXP3Q9BZS1 431 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 TRIM4Q9C037 500 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 FAM117AQ9C073 453 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 EPB41L5Q9HCM4 733 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 TMEM59LQ9UK28 342 aa11.72□□□□□ -0.53
FRG1-201ENST00000226798 HEMK1Q9Y5R4 338 aaPredicted RBP11.72□□□□□ -0.53
FRG1-201ENST00000226798 PRRC2CQ9Y520 2896 aaKnown RBP11.72□□□□□ -0.53
FRG1-201ENST00000226798 SPTAN1Q13813 2472 aaKnown RBP11.71□□□□□ -0.53
FRG1-201ENST00000226798 ARHGEF17Q96PE2 2063 aaPredicted RBP11.71□□□□□ -0.53
FRG1-201ENST00000226798 TMX2-CTNND1H3BSU7 103 aa11.71□□□□□ -0.53
FRG1-201ENST00000226798 FOXN3O00409 490 aaPredicted RBP11.71□□□□□ -0.53
FRG1-201ENST00000226798 NVLO15381 856 aaKnown RBP11.71□□□□□ -0.53
FRG1-201ENST00000226798 TM7SF2O76062 418 aa11.71□□□□□ -0.53
FRG1-201ENST00000226798 GJB6O95452 261 aa11.71□□□□□ -0.53
FRG1-201ENST00000226798 FGFR1OPO95684 399 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms