RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 MED21Q13503 144 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 IHHQ14623 411 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 ALFQ53S48 1182 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 FBXO48Q5FWF7 155 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 CST9Q5W186 159 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 CLEC6AQ6EIG7 209 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 PIM3Q86V86 326 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 KBTBD6Q86V97 674 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 TTC9BQ8N6N2 239 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 KDM1BQ8NB78 822 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 BHLHE22Q8NFJ8 381 aaPredicted RBP14.76□□□□□ -0.05
CNOT3-201ENST00000221232 ANKRD49Q8WVL7 239 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 HMCESQ96FZ2 354 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 ARHGAP39Q9C0H5 1083 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 WDR41Q9HAD4 459 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 YWHAHQ04917 246 aaPredicted RBP14.75□□□□□ -0.05
CNOT3-201ENST00000221232 BTKQ06187 659 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 BIRC2Q13490 618 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 PSMD5Q16401 504 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 UGP2Q16851 508 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 PIK3R6Q5UE93 754 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 METTL21CQ5VZV1 264 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 BNC2Q6ZN30 1099 aaPredicted RBP14.75□□□□□ -0.05
CNOT3-201ENST00000221232 TSGA13Q96PP4 275 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 MRPL46Q9H2W6 279 aaKnown RBP14.75□□□□□ -0.05
CNOT3-201ENST00000221232 CCDC167Q9P0B6 97 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 MID2Q9UJV3 735 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 PSMD3O43242 534 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 ETS2P15036 469 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 ALDH1A3P47895 512 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 ARSDP51689 593 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 CDH13P55290 713 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 USP46P62068 366 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 RANBP10Q6VN20 620 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 SPATA24Q86W54 205 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 TTC16Q8NEE8 873 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 ZNF483Q8TF39 744 aaPredicted RBP14.75□□□□□ -0.05
CNOT3-201ENST00000221232 IRGQQ8WZA9 623 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 HDAC10Q969S8 669 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 PSMG2Q969U7 264 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 TRMT13Q9NUP7 481 aaKnown RBP14.75□□□□□ -0.05
CNOT3-201ENST00000221232 ADRA1AP35348 466 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 KCNC1P48547 511 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 FBXL19Q6PCT2 694 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 ATAD1Q8NBU5 361 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 HAPLN3Q96S86 360 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 PCDHAC1Q9H158 963 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 NOL6Q9H6R4 1146 aaKnown RBP14.75□□□□□ -0.05
CNOT3-201ENST00000221232 ALG9Q9H6U8 611 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 ENTPD7Q9NQZ7 604 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 PAPOLBQ9NRJ5 636 aaKnown RBP14.75□□□□□ -0.05
CNOT3-201ENST00000221232 NSMCE4AQ9NXX6 385 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 DNAJB4Q9UDY4 337 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 NOD1Q9Y239 953 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 ACTL7AQ9Y615 435 aa14.75□□□□□ -0.05
CNOT3-201ENST00000221232 C9JVG2 144 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 H2AFYO75367 372 aaKnown RBP14.74□□□□□ -0.05
CNOT3-201ENST00000221232 FAM163BP0C2L3 166 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 FOLH1Q04609 750 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 GK3PQ14409 553 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 GPR158Q5T848 1215 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 POTEHQ6S545 545 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 ICA1LQ8NDH6 482 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 OR52K2Q8NGK3 314 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 RP9Q8TA86 221 aaKnown RBP14.74□□□□□ -0.05
CNOT3-201ENST00000221232 UBE2OQ9C0C9 1292 aaKnown RBP14.74□□□□□ -0.05
CNOT3-201ENST00000221232 TRPC7Q9HCX4 862 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 NCKIPSDQ9NZQ3 722 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 SLC27A5Q9Y2P5 690 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 DTNAQ9Y4J8 743 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 ASB3Q9Y575 518 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 TSC2P49815 1807 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 MYOCOSA0A1B0GUC4 107 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 CACNG3O60359 315 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 PGM3O95394 542 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 IGLV3-25P01717 112 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 UQCRBP14927 111 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 PAMP19021 973 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 HADHAP40939 763 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 OR1G1P47890 313 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 C1QTNF8P60827 252 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 C16orf89Q6UX73 402 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 RTL3Q8N8U3 475 aaKnown RBP14.74□□□□□ -0.05
CNOT3-201ENST00000221232 C2CD4AQ8NCU7 369 aaPredicted RBP14.74□□□□□ -0.05
CNOT3-201ENST00000221232 JADE3Q92613 823 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 UPF1Q92900 1129 aaKnown RBP eCLIP14.74□□□□□ -0.05
CNOT3-201ENST00000221232 NR1H4Q96RI1 486 aaPredicted RBP14.74□□□□□ -0.05
CNOT3-201ENST00000221232 SEMA6AQ9H2E6 1030 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 IGSF5Q9NSI5 407 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 MARCH4Q9P2E8 410 aaPredicted RBP14.74□□□□□ -0.05
CNOT3-201ENST00000221232 STK39Q9UEW8 545 aa14.74□□□□□ -0.05
CNOT3-201ENST00000221232 LAMA3Q16787 3333 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 SDHDO14521 159 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 DUSP11O75319 330 aaKnown RBP14.73□□□□□ -0.05
CNOT3-201ENST00000221232 YWHAQP27348 245 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 HOXC8P31273 242 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 MLLT6P55198 1093 aaPredicted RBP14.73□□□□□ -0.05
CNOT3-201ENST00000221232 RALGDSQ12967 914 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 FRG1Q14331 258 aaKnown RBP14.73□□□□□ -0.05
CNOT3-201ENST00000221232 ZNF423Q2M1K9 1284 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms