RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 ELOVL4Q9GZR5 314 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 POLR1BQ9H9Y6 1135 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 FETUBQ9UGM5 382 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 SCN1AP35498 2009 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 hCG_1818297A0A087WSY0 165 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-201ENST00000220429 TNFAIP2Q03169 654 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 IKBKEQ14164 716 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 SMYD5Q6GMV2 418 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 KIAA1841Q6NSI8 718 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 TTC33Q6PID6 262 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-201ENST00000220429 ABHD11Q8NFV4 315 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 E2F7Q96AV8 911 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 GIMAP5Q96F15 307 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 CPXM1Q96SM3 734 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 C8orf4Q9NR00 106 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 UCKL1Q9NWZ5 548 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 PACSIN3Q9UKS6 424 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 PDHXO00330 501 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 MTSS1O43312 755 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 MED7O43513 233 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 PIAS1O75925 651 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 COL6A1P12109 1028 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 EEF1DP29692 281 aaKnown RBP13.76□□□□□ -0.21
GABPB1-201ENST00000220429 RACK1P63244 317 aaKnown RBP13.76□□□□□ -0.21
GABPB1-201ENST00000220429 CCNA1P78396 465 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 PTPN11Q06124 597 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-201ENST00000220429 GRSF1Q12849 480 aaKnown RBP eCLIP13.76□□□□□ -0.21
GABPB1-201ENST00000220429 PEX6Q13608 980 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 CCDC142Q17RM4 750 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 FAM205BPQ63HN1 556 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 DRICH1Q6PGQ1 229 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-201ENST00000220429 FRMD7Q6ZUT3 714 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 GSTA5Q7RTV2 222 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 ARFGAP1Q8N6T3 406 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 GTF3C2Q8WUA4 911 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-201ENST00000220429 TFB1MQ8WVM0 346 aaKnown RBP13.76□□□□□ -0.21
GABPB1-201ENST00000220429 TTC9Q92623 222 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 EMID1Q96A84 441 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-201ENST00000220429 CFAP36Q96G28 342 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 STN1Q9H668 368 aaKnown RBP13.76□□□□□ -0.21
GABPB1-201ENST00000220429 ZNF229Q9UJW7 825 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 UGT2A1Q9Y4X1 527 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 MAU2Q9Y6X3 613 aa13.76□□□□□ -0.21
GABPB1-201ENST00000220429 ARPC4-TTLL3A0A0A6YYG9 625 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 LOC100653049A0A140TA62 436 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 SNPHO15079 494 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 CILPO75339 1184 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 KRT34O76011 436 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 SNAI1O95863 264 aaPredicted RBP13.75□□□□□ -0.21
GABPB1-201ENST00000220429 PSMA2P25787 234 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 PTPN7P35236 360 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 NUDT1P36639 197 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 CDKN2BP42772 138 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 MAPK10P53779 464 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 IQSEC1Q6DN90 963 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 ILDR2Q71H61 639 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 SLC22A16Q86VW1 577 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 KIAA0319LQ8IZA0 1049 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 OMA1Q96E52 524 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 FERD3LQ96RJ6 166 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 DHRS4Q9BTZ2 278 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 ASB7Q9H672 318 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 SYTL2Q9HCH5 934 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 ATP13A2Q9NQ11 1180 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 TESMINQ9Y4I5 508 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 KCNH1O95259 989 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 KRT8P05787 483 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 TMBIM6P55061 237 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 MAP3K7CLP57077 242 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 PRAMEP78395 509 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 SLC25A11Q02978 314 aaKnown RBP13.75□□□□□ -0.21
GABPB1-201ENST00000220429 TUBB3Q13509 450 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 POU6F1Q14863 301 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 ANO4Q32M45 955 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 TFDP3Q5H9I0 405 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 PXDC1Q5TGL8 231 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 KCTD20Q7Z5Y7 419 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 CAND1Q86VP6 1230 aaKnown RBP13.75□□□□□ -0.21
GABPB1-201ENST00000220429 XYLT1Q86Y38 959 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 SGCDQ92629 289 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 MS4A4AQ96JQ5 239 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 SERPINI1Q99574 410 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 TMEM121Q9BTD3 319 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 MECRQ9BV79 373 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 MKRN2Q9H000 416 aaKnown RBP13.75□□□□□ -0.21
GABPB1-201ENST00000220429 VRTNQ9H8Y1 702 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 MOCS1Q9NZB8 636 aa13.75□□□□□ -0.21
GABPB1-201ENST00000220429 COL1A2P08123 1366 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 SCN4AP35499 1836 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 C3orf70A6NLC5 250 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-201ENST00000220429 EVPLLA8MZ36 301 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 FAM155AB1AL88 458 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-201ENST00000220429 H3BRB1 525 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 MAN1A2O60476 641 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 LRCH4O75427 683 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 NADKO95544 446 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-201ENST00000220429 ZSCAN5DPP0CG00 497 aa13.74□□□□□ -0.21
GABPB1-201ENST00000220429 ETS1P14921 441 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms