RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TMPRSS6Q8IU80 811 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 TSTD1Q8NFU3 115 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 IPMKQ8NFU5 416 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 CCHCR1Q8TD31 782 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 KLHL32Q96NJ5 620 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 FBRSQ9HAH7 460 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 FAM187AA6NFU0 413 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 E7EVH7 732 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 GEMP55040 296 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 RPS14P62263 151 aaKnown RBP27.52■■■□□ 2
CHMP4B-201ENST00000217402 TMIEQ8NEW7 156 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 TADA1Q96BN2 335 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 LRIG1Q96JA1 1093 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 IER2Q9BTL4 223 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 TDRD1Q9BXT4 1180 aaKnown RBP27.52■■■□□ 2
CHMP4B-201ENST00000217402 OSBPL1AQ9BXW6 950 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 SPATA6Q9NWH7 488 aaPredicted RBP27.52■■■□□ 2
CHMP4B-201ENST00000217402 FAM86C2PA6NEL3 165 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 C1QTNF3-AMACRE9PGA6 284 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 NDUFV2P19404 249 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 WNT3AP56704 352 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 SLC7A5Q01650 507 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 MPP3Q13368 585 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 CST6Q15828 149 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 CFAP58Q5T655 872 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 ANO7Q6IWH7 933 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 KDELC1Q6UW63 502 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 PDCD7Q8N8D1 485 aaKnown RBP27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 TMEM105Q8N8V8 129 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 MRGPRX1Q96LB2 322 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 PPP1R2P1Q96PQ5 205 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 SUV39H2Q9H5I1 410 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 VPS45Q9NRW7 570 aa27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 BCCIPQ9P287 314 aaKnown RBP eCLIP27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 AAR2Q9Y312 384 aaKnown RBP27.51■■□□□ 1.99
CHMP4B-201ENST00000217402 SLC34A2O95436 690 aa27.5■■□□□ 1.99
CHMP4B-201ENST00000217402 GABRG2P18507 467 aa27.5■■□□□ 1.99
CHMP4B-201ENST00000217402 LMAN1P49257 510 aa27.5■■□□□ 1.99
CHMP4B-201ENST00000217402 SEMA5AQ13591 1074 aa27.5■■□□□ 1.99
CHMP4B-201ENST00000217402 SPARCL1Q14515 664 aa27.5■■□□□ 1.99
CHMP4B-201ENST00000217402 KIAA1324Q6UXG2 1013 aaKnown RBP27.5■■□□□ 1.99
CHMP4B-201ENST00000217402 FBXL6Q8N531 539 aa27.5■■□□□ 1.99
CHMP4B-201ENST00000217402 ZNF641Q96N77 438 aaPredicted RBP27.5■■□□□ 1.99
CHMP4B-201ENST00000217402 HINFPQ9BQA5 517 aa27.5■■□□□ 1.99
CHMP4B-201ENST00000217402 FSD1LQ9BXM9 530 aa27.5■■□□□ 1.99
CHMP4B-201ENST00000217402 CHKBQ9Y259 395 aa27.5■■□□□ 1.99
CHMP4B-201ENST00000217402 PCDHB9Q9Y5E1 797 aa27.5■■□□□ 1.99
CHMP4B-201ENST00000217402 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 GOLGA6CA6NDK9 693 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 GOLGA6BA6NDN3 693 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 EFCAB8A8MWE9 144 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 TRAFD1O14545 582 aaPredicted RBP27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 MID1O15344 667 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 SOCS5O75159 536 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 APRTP07741 180 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 GOLGA6DP0CG33 693 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 CA4P22748 312 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 SLC8A1P32418 973 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 CXCL12P48061 93 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 OLIG2Q13516 323 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 SLC14A2Q15849 920 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 FAM46CQ5VWP2 391 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 PGBD3Q8N328 593 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 PRCCQ92733 491 aaPredicted RBP27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 SIPA1Q96FS4 1042 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 IFT43Q96FT9 208 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 MRGPRX2Q96LB1 330 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 GOLGA6AQ9NYA3 693 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 PLK4O00444 970 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 SLU7O95391 586 aaKnown RBP27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 ADH1BP00325 375 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 CCR3P51677 355 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 ZNF805Q5CZA5 627 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 ARRDC3Q96B67 414 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 LRRC45Q96CN5 670 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 APOL2Q9BQE5 337 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 ERP44Q9BS26 406 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 FICDQ9BVA6 458 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 DPH5Q9H2P9 285 aa27.49■■□□□ 1.99
CHMP4B-201ENST00000217402 HTRA2O43464 458 aaPredicted RBP27.48■■□□□ 1.99
CHMP4B-201ENST00000217402 USP12O75317 370 aa27.48■■□□□ 1.99
CHMP4B-201ENST00000217402 DNTTP04053 509 aa27.48■■□□□ 1.99
CHMP4B-201ENST00000217402 PDHA1P08559 390 aa27.48■■□□□ 1.99
CHMP4B-201ENST00000217402 CDK18Q07002 472 aa27.48■■□□□ 1.99
CHMP4B-201ENST00000217402 ARMC12Q5T9G4 340 aa27.48■■□□□ 1.99
CHMP4B-201ENST00000217402 BMP8AQ7Z5Y6 402 aa27.48■■□□□ 1.99
CHMP4B-201ENST00000217402 ZSWIM9Q86XI8 627 aa27.48■■□□□ 1.99
CHMP4B-201ENST00000217402 MDGA1Q8NFP4 955 aa27.48■■□□□ 1.99
CHMP4B-201ENST00000217402 PPP1R16AQ96I34 528 aa27.48■■□□□ 1.99
CHMP4B-201ENST00000217402 DYRK4Q9NR20 520 aa27.48■■□□□ 1.99
CHMP4B-201ENST00000217402 UTP11Q9Y3A2 253 aaKnown RBP27.48■■□□□ 1.99
CHMP4B-201ENST00000217402 ANKRD36A6QL64 1941 aa27.48■■□□□ 1.99
CHMP4B-201ENST00000217402 RIOK3O14730 519 aaKnown RBP27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 ALDH1A2O94788 518 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 HEXIM1O94992 359 aaKnown RBP27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 PGLSO95336 258 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 AP2A1O95782 977 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 ITGB7P26010 798 aa27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 PXNP49023 591 aaPredicted RBP27.47■■□□□ 1.99
CHMP4B-201ENST00000217402 GALNT3Q14435 633 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms