RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 ARP10275 920 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 IL12AP29459 219 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 BAG6P46379 1132 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 P2RX3P56373 397 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 IRF9Q00978 393 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 AQP6Q13520 282 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 CCDC142Q17RM4 750 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 JADE1Q6IE81 842 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 LYPD8Q6UX82 237 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 GALNT13Q8IUC8 556 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 MAP6Q96JE9 813 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 TDRD1Q9BXT4 1180 aaKnown RBP14.79□□□□□ -0.04
PTPRA-201ENST00000216877 EMILIN2Q9BXX0 1053 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 ENTPD7Q9NQZ7 604 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 TK2O00142 265 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 TSHRP16473 764 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 PRKACAP17612 351 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 RPS9P46781 194 aaKnown RBP14.79□□□□□ -0.04
PTPRA-201ENST00000216877 C1QBPQ07021 282 aaKnown RBP14.79□□□□□ -0.04
PTPRA-201ENST00000216877 CAPRIN1Q14444 709 aaKnown RBP14.79□□□□□ -0.04
PTPRA-201ENST00000216877 FAM35AQ86V20 835 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 CAND1Q86VP6 1230 aaKnown RBP14.79□□□□□ -0.04
PTPRA-201ENST00000216877 RNF135Q8IUD6 432 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.79□□□□□ -0.04
PTPRA-201ENST00000216877 MCUQ8NE86 351 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 OR2T34Q8NGX1 318 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 HDAC10Q969S8 669 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 SLCO4A1Q96BD0 722 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 PSD2Q9BQI7 771 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 PCDH10Q9P2E7 1040 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 FAM172BPA6NC97 362 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 H3BUI4 141 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 ZNF195O14628 629 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 SCO1O75880 301 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 TGM1P22735 817 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 SERPINH1P50454 418 aaKnown RBP14.79□□□□□ -0.04
PTPRA-201ENST00000216877 TNK2Q07912 1038 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 ENOSF1Q7L5Y1 443 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 R3HCC1LQ7Z5L2 792 aaKnown RBP14.79□□□□□ -0.04
PTPRA-201ENST00000216877 NDNFQ8TB73 568 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 TEKT3Q9BXF9 490 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 RSAD1Q9HA92 442 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 CYP4F12Q9HCS2 524 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 SNX15Q9NRS6 342 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 ZDHHC2Q9UIJ5 367 aa14.79□□□□□ -0.04
PTPRA-201ENST00000216877 CDK2AP1O14519 115 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 BBOX1O75936 387 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 FOSP01100 380 aaPredicted RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 HSPA1AP0DMV8 641 aaKnown RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 HSPA1BP0DMV9 641 aaKnown RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 MTHFD1P11586 935 aaKnown RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 HNRNPLP14866 589 aaKnown RBP eCLIP14.78□□□□□ -0.048e-8■■□□□ 13.5
PTPRA-201ENST00000216877 MLLT3P42568 568 aaPredicted RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 CLK1P49759 484 aaKnown RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 KCNC4Q03721 635 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 PPP1R8Q12972 351 aaKnown RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 RPS6KA2Q15349 733 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 AASDHQ4L235 1098 aaPredicted RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 ZNF772Q68DY9 489 aaPredicted RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 UBE2Q1Q7Z7E8 422 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 ZNF677Q86XU0 584 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 MAT2BQ9NZL9 334 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 SPATA31A6Q5VVP1 1343 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 C16orf96A6NNT2 1141 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 INMTO95050 263 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 NCK1P16333 377 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 MGAT1P26572 445 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 ILF2Q12905 390 aaKnown RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 CUL2Q13617 745 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 STK11Q15831 433 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 NFIL3Q16649 462 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 ZBTB41Q5SVQ8 909 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 CATSPER4Q7RTX7 472 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 OSTM1Q86WC4 334 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 OR13F1Q8NGS4 319 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 PROX1Q92786 737 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 TRIM63Q969Q1 353 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 CCDC120Q96HB5 630 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 IL37Q9NZH6 218 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 CYP3A7-CYP3A51PA0A087WV96 503 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 TCAF2A6NFQ2 919 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 H0Y626 953 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 CHADO15335 359 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 CPNE3O75131 537 aaKnown RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 LRCH4O75427 683 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 ALX3O95076 343 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 MBL2P11226 248 aaPredicted RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 MIPP30301 263 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 TFAMQ00059 246 aaKnown RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 GCNT1Q02742 428 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 DMP1Q13316 513 aaPredicted RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 KCNJ11Q14654 390 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 SAMD4BQ5PRF9 694 aaKnown RBP14.78□□□□□ -0.04
PTPRA-201ENST00000216877 ERMP1Q7Z2K6 904 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 THNSL1Q8IYQ7 743 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 TTC30BQ8N4P2 665 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 LEMD2Q8NC56 503 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 RNF145Q96MT1 663 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 WDR18Q9BV38 432 aa14.78□□□□□ -0.04
PTPRA-201ENST00000216877 MRPL9Q9BYD2 267 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms