RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 IFT43Q96FT9 208 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 MRPL17Q9NRX2 175 aaKnown RBP29.96■■■□□ 2.39
PABPN1-201ENST00000216727 HAO1Q9UJM8 370 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 INSL5Q9Y5Q6 135 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 ANAPC1Q9H1A4 1944 aa29.96■■■□□ 2.39
PABPN1-201ENST00000216727 FAM95CA0A1B0GW59 222 aa29.95■■■□□ 2.39
PABPN1-201ENST00000216727 TRAFD1O14545 582 aaPredicted RBP29.95■■■□□ 2.39
PABPN1-201ENST00000216727 SLC7A4O43246 635 aa29.95■■■□□ 2.39
PABPN1-201ENST00000216727 ITM2AO43736 263 aa29.95■■■□□ 2.39
PABPN1-201ENST00000216727 HAUS5O94927 633 aa29.95■■■□□ 2.39
PABPN1-201ENST00000216727 SERPINF2P08697 491 aa29.95■■■□□ 2.39
PABPN1-201ENST00000216727 OXCT1P55809 520 aa29.95■■■□□ 2.39
PABPN1-201ENST00000216727 RAB10P61026 200 aa29.95■■■□□ 2.39
PABPN1-201ENST00000216727 LAMB3Q13751 1172 aa29.95■■■□□ 2.39
PABPN1-201ENST00000216727 TMEM150AQ86TG1 271 aa29.95■■■□□ 2.39
PABPN1-201ENST00000216727 KIF2BQ8N4N8 673 aa29.95■■■□□ 2.39
PABPN1-201ENST00000216727 TSNARE1Q96NA8 513 aa29.95■■■□□ 2.39
PABPN1-201ENST00000216727 C11orf49Q9H6J7 331 aa29.95■■■□□ 2.39
PABPN1-201ENST00000216727 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP29.95■■■□□ 2.395e-9■■■■□ 19.8
PABPN1-201ENST00000216727 UBA2Q9UBT2 640 aaPredicted RBP29.95■■■□□ 2.39
PABPN1-201ENST00000216727 LATS1O95835 1130 aa29.95■■■□□ 2.38
PABPN1-201ENST00000216727 CRABP2P29373 138 aa29.95■■■□□ 2.38
PABPN1-201ENST00000216727 PPM1AP35813 382 aa29.95■■■□□ 2.38
PABPN1-201ENST00000216727 GJA8P48165 433 aa29.95■■■□□ 2.38
PABPN1-201ENST00000216727 AQP5P55064 265 aa29.95■■■□□ 2.38
PABPN1-201ENST00000216727 SLC41A1Q8IVJ1 513 aa29.95■■■□□ 2.38
PABPN1-201ENST00000216727 WDR75Q8IWA0 830 aaKnown RBP29.95■■■□□ 2.38
PABPN1-201ENST00000216727 MFSD6LQ8IWD5 586 aa29.95■■■□□ 2.38
PABPN1-201ENST00000216727 ACE2Q9BYF1 805 aaPredicted RBP29.95■■■□□ 2.38
PABPN1-201ENST00000216727 FBXO6Q9NRD1 293 aaPredicted RBP29.95■■■□□ 2.38
PABPN1-201ENST00000216727 LNPEPQ9UIQ6 1025 aa29.95■■■□□ 2.38
PABPN1-201ENST00000216727 RHOCP08134 193 aa29.94■■■□□ 2.38
PABPN1-201ENST00000216727 STMN1P16949 149 aa29.94■■■□□ 2.38
PABPN1-201ENST00000216727 SGSHP51688 502 aa29.94■■■□□ 2.38
PABPN1-201ENST00000216727 ITGA9Q13797 1035 aa29.94■■■□□ 2.38
PABPN1-201ENST00000216727 HERC6Q8IVU3 1022 aa29.94■■■□□ 2.38
PABPN1-201ENST00000216727 PARP9Q8IXQ6 854 aa29.94■■■□□ 2.38
PABPN1-201ENST00000216727 LMNTD2Q8IXW0 634 aa29.94■■■□□ 2.38
PABPN1-201ENST00000216727 PPP4R1Q8TF05 950 aa29.94■■■□□ 2.38
PABPN1-201ENST00000216727 SREK1Q8WXA9 508 aaKnown RBP29.94■■■□□ 2.38
PABPN1-201ENST00000216727 TMEM237Q96Q45 408 aa29.94■■■□□ 2.38
PABPN1-201ENST00000216727 SPON2Q9BUD6 331 aa29.94■■■□□ 2.38
PABPN1-201ENST00000216727 CAMSAP3Q9P1Y5 1249 aaPredicted RBP29.94■■■□□ 2.38
PABPN1-201ENST00000216727 MARCOQ9UEW3 520 aaPredicted RBP29.94■■■□□ 2.38
PABPN1-201ENST00000216727 ACOT9Q9Y305 439 aa29.94■■■□□ 2.38
PABPN1-201ENST00000216727 TRIM43BA6NCK2 446 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 C2orf71A6NGG8 1288 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 PHGDHO43175 533 aaKnown RBP29.93■■■□□ 2.38
PABPN1-201ENST00000216727 LDB2O43679 373 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 LYPLA1O75608 230 aaPredicted RBP29.93■■■□□ 2.38
PABPN1-201ENST00000216727 GJB3O75712 270 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 CBX6O95503 412 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 KITP10721 976 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 LEPRP48357 1165 aaKnown RBP29.93■■■□□ 2.38
PABPN1-201ENST00000216727 ABCE1P61221 599 aaKnown RBP29.93■■■□□ 2.38
PABPN1-201ENST00000216727 POU4F1Q01851 419 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 DDX51Q8N8A6 666 aaKnown RBP eCLIP29.93■■■□□ 2.38
PABPN1-201ENST00000216727 AUTS2Q8WXX7 1259 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 TRIM43Q96BQ3 446 aaPredicted RBP29.93■■■□□ 2.38
PABPN1-201ENST00000216727 SLC7A6OSQ96CW6 309 aaPredicted RBP29.93■■■□□ 2.38
PABPN1-201ENST00000216727 SORT1Q99523 831 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 MFSD1Q9H3U5 465 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 STN1Q9H668 368 aaKnown RBP29.93■■■□□ 2.38
PABPN1-201ENST00000216727 H2AFYO75367 372 aaKnown RBP29.93■■■□□ 2.38
PABPN1-201ENST00000216727 SAT1P21673 171 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 ACVR1Q04771 509 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 KRT72Q14CN4 511 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 TMEM151AQ8N4L1 468 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 WBP2Q969T9 261 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 PAWRQ96IZ0 340 aaKnown RBP29.93■■■□□ 2.38
PABPN1-201ENST00000216727 ZFRQ96KR1 1074 aaKnown RBP29.93■■■□□ 2.38
PABPN1-201ENST00000216727 TASP1Q9H6P5 420 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 WBP1LQ9NX94 342 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 STK39Q9UEW8 545 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 DNAJC16Q9Y2G8 782 aa29.93■■■□□ 2.38
PABPN1-201ENST00000216727 KIAA0355O15063 1070 aa29.92■■■□□ 2.38
PABPN1-201ENST00000216727 LILRB3O75022 631 aa29.92■■■□□ 2.38
PABPN1-201ENST00000216727 F11P03951 625 aa29.92■■■□□ 2.38
PABPN1-201ENST00000216727 IRF1P10914 325 aa29.92■■■□□ 2.38
PABPN1-201ENST00000216727 CREMQ03060 361 aa29.92■■■□□ 2.38
PABPN1-201ENST00000216727 ITIH5Q86UX2 942 aa29.92■■■□□ 2.38
PABPN1-201ENST00000216727 CENPLQ8N0S6 344 aaPredicted RBP29.92■■■□□ 2.38
PABPN1-201ENST00000216727 CINPQ9BW66 212 aaPredicted RBP29.92■■■□□ 2.38
PABPN1-201ENST00000216727 BAIAP3O94812 1187 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 KRT16P08779 473 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 RIPK1Q13546 671 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 CEP97Q8IW35 865 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 RAB3IPQ96QF0 476 aaPredicted RBP29.91■■■□□ 2.38
PABPN1-201ENST00000216727 TRIB3Q96RU7 358 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 FAM96AQ9H5X1 160 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 OXSMQ9NWU1 459 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 RIMKLBQ9ULI2 386 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 TMEM114B3SHH9 223 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 FCHO1O14526 889 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 TEX28O15482 410 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 TRIM13O60858 407 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 MBL2P11226 248 aaPredicted RBP29.91■■■□□ 2.38
PABPN1-201ENST00000216727 PABPC1LQ4VXU2 614 aaKnown RBP29.91■■■□□ 2.38
PABPN1-201ENST00000216727 ZNF783Q6ZMS7 281 aa29.91■■■□□ 2.38
PABPN1-201ENST00000216727 YME1L1Q96TA2 773 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms