RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 DACT2Q5SW24 774 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 RNASE11Q8TAA1 199 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 RNF157Q96PX1 679 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 KIFC1Q9BW19 673 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 MIR1-1HGQ9H1L0 117 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 SOHLH2Q9NX45 425 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 IKZF3Q9UKT9 509 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 TRHDEQ9UKU6 1024 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 FADS2O95864 444 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 ITPKAP23677 461 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 ACSM2AQ08AH3 577 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 TAF13Q15543 124 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 PTPRNQ16849 979 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 ACSM2BQ68CK6 577 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 MRGBPQ9NV56 204 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 GMPPBQ9Y5P6 360 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 ZMYM2Q9UBW7 1377 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 CHADO15335 359 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 UNC5CO95185 931 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 IL12RB1P42701 662 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 ST13P50502 369 aaKnown RBP13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 SAMD4BQ5PRF9 694 aaKnown RBP13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 STXBP5Q5T5C0 1151 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 CLEC6AQ6EIG7 209 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 SPPL2CQ8IUH8 684 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 ARMC8Q8IUR7 673 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 LINGO1Q96FE5 620 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 NUAK2Q9H093 628 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 CRISPLD1Q9H336 500 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 KLHL28Q9NXS3 571 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 TCRBV9S1A1TA0A576 114 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 IRF6O14896 467 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 IL6P05231 212 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 EIF4BP23588 611 aaKnown RBP13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 ADRM1Q16186 407 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 PCID2Q5JVF3 399 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 EEF1DP3Q658K8 133 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 ZCCHC8Q6NZY4 707 aaKnown RBP13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 ULK2Q8IYT8 1036 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 CLIP4Q8N3C7 705 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 CENPIQ92674 756 aaPredicted RBP13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 ALG3Q92685 438 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 ADI1Q9BV57 179 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 KCNMB3Q9NPA1 279 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 RASSF1Q9NS23 344 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 COPG2Q9UBF2 871 aa13.71□□□□□ -0.22
TGFBR3-201ENST00000212355 ABCA9Q8IUA7 1624 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 hCG_1818297A0A087WSY0 165 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 FAM149AA5PLN7 773 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 MED26O95402 600 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 PRMT9Q6P2P2 845 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 RHBDF2Q6PJF5 856 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 KYAT3Q6YP21 454 aaKnown RBP13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 ITIH5Q86UX2 942 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 ABCC13Q9NSE7 274 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 TRPV2Q9Y5S1 764 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 KPNA4O00629 521 aaPredicted RBP13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 ZNF143P52747 638 aaPredicted RBP13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 ARSHQ5FYA8 562 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 LRRC73Q5JTD7 316 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 HPS6Q86YV9 775 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 COPS4Q9BT78 406 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 CDT1Q9H211 546 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 ADAM30Q9UKF2 790 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 TIMM22Q9Y584 194 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 ERAL1O75616 437 aaKnown RBP13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 ICAM3P32942 547 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 IRF8Q02556 426 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 SPANXN2Q5MJ10 180 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 LINGO4Q6UY18 593 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 ACTRT2Q8TDY3 377 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 MLPHQ9BV36 600 aaPredicted RBP13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 ELOVL4Q9GZR5 314 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 TNKS2Q9H2K2 1166 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 TPRKBQ9Y3C4 175 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 MTA2O94776 668 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 FSBPO95073 299 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 IL1BP01584 269 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 PAEPP09466 180 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 YAP1P46937 504 aaKnown RBP13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 DDR1Q08345 913 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 B3GNT6Q6ZMB0 384 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 PYROXD2Q8N2H3 581 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 UBE2J2Q8N2K1 259 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 POC5Q8NA72 575 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 PCSK9Q8NBP7 692 aaKnown RBP13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 OR4A15Q8NGL6 344 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 RAD51AP1Q96B01 352 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 SLC47A1Q96FL8 570 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 ELL3Q9HB65 397 aaPredicted RBP13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 MROH2AA6NES4 1674 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 A0A1B0GW55 424 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 TTC24A2A3L6 582 aaPredicted RBP13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 KLRG2A4D1S0 409 aaPredicted RBP13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 TFECO14948 347 aaPredicted RBP13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 PLOD3O60568 738 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 DUX4L2P0CJ85 424 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 DUX4L3P0CJ86 424 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 DUX4L4P0CJ87 422 aa13.7□□□□□ -0.22
TGFBR3-201ENST00000212355 DUX4L5P0CJ88 424 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms