RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 RPLP2P05387 115 aaKnown RBP12.18□□□□□ -0.46
CHPF2-201ENST00000035307 CTPS1P17812 591 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 ABCE1P61221 599 aaKnown RBP12.18□□□□□ -0.46
CHPF2-201ENST00000035307 RHOAP61586 193 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 DSG1Q02413 1049 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 SEMA5AQ13591 1074 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 C14orf80Q86SX3 495 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 IFNLR1Q8IU57 520 aaPredicted RBP12.18□□□□□ -0.46
CHPF2-201ENST00000035307 NAT8LQ8N9F0 302 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 SPDYE1Q8NFV5 336 aaPredicted RBP12.18□□□□□ -0.46
CHPF2-201ENST00000035307 CXorf38Q8TB03 319 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 CALML6Q8TD86 181 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 SUSD3Q96L08 255 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 SEPHS2Q99611 448 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 MID1IP1Q9NPA3 183 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 SEMA4BQ9NPR2 832 aaPredicted RBP12.18□□□□□ -0.46
CHPF2-201ENST00000035307 GDAP2Q9NXN4 497 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 PLLPQ9Y342 182 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 NME7Q9Y5B8 376 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 GJB5O95377 273 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 CORO1AP31146 461 aaKnown RBP12.18□□□□□ -0.46
CHPF2-201ENST00000035307 MAPK10P53779 464 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 ADGRD1Q6QNK2 874 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 CCNJLQ8IV13 435 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 FAM156AQ8NDB6 213 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 ADNPQ9H2P0 1102 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 TMEM30AQ9NV96 361 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 BTRCQ9Y297 605 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 MKI67P46013 3256 aaKnown RBP12.18□□□□□ -0.46
CHPF2-201ENST00000035307 BRCA2P51587 3418 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 RFPL2O75678 378 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 PSMG1O95456 288 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 GLP2RO95838 553 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 WASP42768 502 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 SLC34A1Q06495 639 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 KHDC1Q4VXA5 237 aaKnown RBP12.17□□□□□ -0.46
CHPF2-201ENST00000035307 MRNIPQ6NTE8 343 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 FNIP1Q8TF40 1166 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 HDAC10Q969S8 669 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 CPNE1Q99829 537 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 EFCAB1Q9HAE3 211 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 WASF2Q9Y6W5 498 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 AXIN1O15169 862 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 BPGMP07738 259 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 THRAP10827 490 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 GSCP56915 257 aaPredicted RBP12.17□□□□□ -0.46
CHPF2-201ENST00000035307 NAIF1Q69YI7 327 aaPredicted RBP12.17□□□□□ -0.46
CHPF2-201ENST00000035307 C16orf89Q6UX73 402 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 MFN1Q8IWA4 741 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 CMASQ8NFW8 434 aaPredicted RBP12.17□□□□□ -0.46
CHPF2-201ENST00000035307 SNX19Q92543 992 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 PSMG2Q969U7 264 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 ESAMQ96AP7 390 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 ADAM7Q9H2U9 754 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 CRLS1Q9UJA2 301 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 PCDHB8Q9UN66 801 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 ACTL7AQ9Y615 435 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 DLEC1Q9Y238 1755 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 TTC36A6NLP5 189 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 HSPA1AP0DMV8 641 aaKnown RBP12.17□□□□□ -0.46
CHPF2-201ENST00000035307 HSPA1BP0DMV9 641 aaKnown RBP12.17□□□□□ -0.46
CHPF2-201ENST00000035307 SLC2A3P11169 496 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 NMBRP28336 390 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 PREPLQ4J6C6 727 aaPredicted RBP12.17□□□□□ -0.46
CHPF2-201ENST00000035307 RALGPS1Q5JS13 557 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 SPANXN3Q5MJ09 141 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 GRTP1Q5TC63 336 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 ESRP1Q6NXG1 681 aaKnown RBP12.17□□□□□ -0.46
CHPF2-201ENST00000035307 RINLQ6ZS11 566 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 ZMIZ2Q8NF64 920 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 UROC1Q96N76 676 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 PHACTR1Q9C0D0 580 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 CFAP97Q9P2B7 532 aa12.17□□□□□ -0.46
CHPF2-201ENST00000035307 TRMT6Q9UJA5 497 aaKnown RBP12.17□□□□□ -0.46
CHPF2-201ENST00000035307 A0A0U1RQS6 177 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 UBDO15205 165 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 RENBPP51606 427 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 WNT3AP56704 352 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 KLF1Q13351 362 aaPredicted RBP12.16□□□□□ -0.46
CHPF2-201ENST00000035307 LPCAT4Q643R3 524 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 RPS27LQ71UM5 84 aaKnown RBP12.16□□□□□ -0.46
CHPF2-201ENST00000035307 HPS6Q86YV9 775 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 LINC01465Q8N7H1 131 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 KYQ8NBH2 561 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 RCN3Q96D15 328 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 THUMPD3Q9BV44 507 aaKnown RBP12.16□□□□□ -0.46
CHPF2-201ENST00000035307 UBE2OQ9C0C9 1292 aaKnown RBP12.16□□□□□ -0.46
CHPF2-201ENST00000035307 UXTQ9UBK9 157 aaPredicted RBP12.16□□□□□ -0.46
CHPF2-201ENST00000035307 ZMYM5Q9UJ78 669 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 FBXO5Q9UKT4 447 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 PCDHGC4Q9Y5F7 938 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 PSAT1Q9Y617 370 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 E9PAM4 449 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 C8AP07357 584 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 SERPINF2P08697 491 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 TFEBP19484 476 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 ABL2P42684 1182 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 IRF9Q00978 393 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 DSC2Q02487 901 aa12.16□□□□□ -0.46
CHPF2-201ENST00000035307 GRM3Q14832 879 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms