RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 PKN3Q6P5Z2 889 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 LPCAT2Q7L5N7 544 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 LDB1Q86U70 411 aaPredicted RBP14.16□□□□□ -0.14
USH1C-201ENST00000005226 PELI3Q8N2H9 469 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 SH3RF2Q8TEC5 729 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 TNIP3Q96KP6 325 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 RPL10LQ96L21 214 aaKnown RBP14.16□□□□□ -0.14
USH1C-201ENST00000005226 DERAQ9Y315 318 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 A0A0G2JLL6 359 aaPredicted RBP14.16□□□□□ -0.14
USH1C-201ENST00000005226 SLCO1B7G3V0H7 640 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 UBDO15205 165 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 GPC4O75487 556 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 H6PDO95479 791 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 RHDQ02161 417 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 GALNT2Q10471 571 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 RFTN1Q14699 578 aaPredicted RBP14.16□□□□□ -0.14
USH1C-201ENST00000005226 USP41Q3LFD5 358 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 ITPRIPL1Q6GPH6 555 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 PRRT2Q7Z6L0 340 aaPredicted RBP14.16□□□□□ -0.14
USH1C-201ENST00000005226 TMEM126BQ8IUX1 230 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 RNF34Q969K3 372 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 ZNF597Q96LX8 424 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 ZFP42Q96MM3 310 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 COLEC11Q9BWP8 271 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 MRPL46Q9H2W6 279 aaKnown RBP14.16□□□□□ -0.14
USH1C-201ENST00000005226 CRTAC1Q9NQ79 661 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 RSL24D1Q9UHA3 163 aaKnown RBP14.16□□□□□ -0.14
USH1C-201ENST00000005226 CNOT6Q9ULM6 557 aaKnown RBP14.16□□□□□ -0.14
USH1C-201ENST00000005226 PTGDR2Q9Y5Y4 395 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 HEATR9A2RTY3 570 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 MYBPHLA2RUH7 354 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 CLIC3O95833 236 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 HSPA13P48723 471 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 SLC7A2P52569 658 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 NAPEPLDQ6IQ20 393 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 CHSY3Q70JA7 882 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 FAM47BQ8NA70 645 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 CANT1Q8WVQ1 401 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 HDAC11Q96DB2 347 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 MAELQ96JY0 434 aaKnown RBP14.15□□□□□ -0.14
USH1C-201ENST00000005226 OLFM1Q99784 485 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 SMOQ99835 787 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 UNC93B1Q9H1C4 597 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 WDCPQ9H6R7 721 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 NCKIPSDQ9NZQ3 722 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 TRHDEQ9UKU6 1024 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 MRASO14807 208 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 TRIM24O15164 1050 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 HTRA2O43464 458 aaPredicted RBP14.15□□□□□ -0.14
USH1C-201ENST00000005226 GPR32O75388 356 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 ARCN1P48444 511 aaKnown RBP14.15□□□□□ -0.14
USH1C-201ENST00000005226 SH3BGRP55822 239 aaPredicted RBP14.15□□□□□ -0.14
USH1C-201ENST00000005226 DAOAP59103 153 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 PLOD1Q02809 727 aaPredicted RBP14.15□□□□□ -0.14
USH1C-201ENST00000005226 PCSK7Q16549 785 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 BTBD8Q5XKL5 378 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 DENND5AQ6IQ26 1287 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 DUS1LQ6P1R4 473 aaKnown RBP14.15□□□□□ -0.14
USH1C-201ENST00000005226 NOTUMQ6P988 496 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 ZBTB49Q6ZSB9 765 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 CARM1Q86X55 608 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 ZMIZ2Q8NF64 920 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 PPTC7Q8NI37 304 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 TBL1YQ9BQ87 522 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 GDAP2Q9NXN4 497 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 AURKCQ9UQB9 309 aa14.15□□□□□ -0.14
USH1C-201ENST00000005226 TDRKHQ9Y2W6 561 aaKnown RBP14.15□□□□□ -0.14
USH1C-201ENST00000005226 TRPC5OSA6NMA1 111 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 MEIS3P2A8K0S8 358 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 H3BNH8 94 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 SLC22A2O15244 555 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 AKAP10O43572 662 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 ADSLP30566 484 aaPredicted RBP14.14□□□□□ -0.15
USH1C-201ENST00000005226 GRIA3P42263 894 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 KCNC1P48547 511 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 AFF1P51825 1210 aaKnown RBP14.14□□□□□ -0.15
USH1C-201ENST00000005226 PRKCQQ04759 706 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 PRPSAP1Q14558 356 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 PCID2Q5JVF3 399 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 C6orf10Q5SRN2 563 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 CUZD1Q86UP6 607 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 EXT2Q93063 718 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 DCUN1D5Q9BTE7 237 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 IGSF5Q9NSI5 407 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 DUS2Q9NX74 493 aaKnown RBP14.14□□□□□ -0.15
USH1C-201ENST00000005226 EBF1Q9UH73 591 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 EGFL7Q9UHF1 273 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 PLXNA1Q9UIW2 1896 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 NRCAMQ92823 1304 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 ERI2A8K979 691 aaKnown RBP14.14□□□□□ -0.15
USH1C-201ENST00000005226 A8MT66 165 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 PPP6CO00743 305 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 UBFD1O14562 309 aaKnown RBP14.14□□□□□ -0.15
USH1C-201ENST00000005226 C8BP07358 591 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 ZNF23P17027 643 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 ATP6V1B2P21281 511 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 SLC12A2P55011 1212 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 CDH13P55290 713 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 CCNA1P78396 465 aa14.14□□□□□ -0.15
USH1C-201ENST00000005226 TXNL4AP83876 142 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms