RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Gpr19Q61121 415 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Stx3Q64704 289 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Dnajc15Q78YY6 149 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Rassf6Q80UQ2 353 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Tusc3Q8BTV1 347 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Arhgap12Q8C0D4 838 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Ddx18Q8K363 660 aaKnown RBP16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Nup85Q8R480 656 aaKnown RBP16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Ccdc71Q8VEG0 433 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Rp1P56716 2095 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Kntc1Q8C3Y4 2207 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Gm7073E9QAS1 335 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Serpini1O35684 410 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 ChrngP04760 519 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 KitP05532 979 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Cyp17a1P27786 507 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Rps24P62849 133 aaKnown RBP16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Ceacam5Q3UKK2 947 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Lrrc8bQ5DU41 803 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Rxfp4Q7TQP4 414 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Btbd10Q80X66 475 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 PdhxQ8BKZ9 501 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 PompQ9CQT5 141 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Cpxm2Q9D2L5 764 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Cog8Q9JJA2 640 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 Nupr1Q9WTK0 80 aa16.05■□□□□ 0.16
Trim39-203ENSMUST00000113706 PtprdQ64487 1912 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 PtproE9Q612 1226 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Kpna2P52293 529 aaKnown RBP16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Adamts8P57110 905 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Slc8a1P70414 970 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Q32P12 615 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Fam120bQ6RI63 786 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Arhgap25Q8BYW1 648 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Nlrp10Q8CCN1 673 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Sgpl1Q8R0X7 568 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Armc9Q9D2I5 817 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Pi16Q9ET66 489 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Gm12248A0A1W2P8B8 313 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Olfr1160A2AVT0 319 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Adamts14E9PX39 1209 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Zfp780bE9Q2S6 806 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 E2f2P56931 443 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 AurkaP97477 395 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 PrkcqQ02111 707 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Zfp607aQ3TQG9 686 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Ptpn18Q61152 453 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 HiraQ61666 1015 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Zfp719Q8BIV1 735 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Slc17a6Q8BLE7 582 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Acad9Q8JZN5 625 aaKnown RBP16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Pitrm1Q8K411 1036 aaKnown RBP16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Ccdc22Q9JIG7 627 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Dthd1E9PZX1 795 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Klc2O88448 599 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Coro1aO89053 461 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Fbp2P70695 339 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Stx2Q00262 289 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Gucy2fQ5SDA5 1108 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Arcn1Q5XJY5 511 aaKnown RBP16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Grik1Q60934 836 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Cd6Q61003 665 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 SowahcQ8C0J6 512 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Taf12Q8VE65 161 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Trim7Q923T7 510 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Spg21Q9CQC8 308 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Tbc1d20Q9D9I4 402 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Tubb3Q9ERD7 450 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 HemgnQ9ERZ0 503 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 Akr1c12Q9JLI0 323 aa16.04■□□□□ 0.16
Trim39-203ENSMUST00000113706 MaptP10637 733 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Gspt2Q149F3 632 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 MlipQ5FW52 269 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Ubr7Q8BU04 425 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Tekt2Q922G7 430 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Pramel1Q99MW3 458 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Ndufaf1Q9CWX2 328 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Oaz3Q9R109 243 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Per3O70361 1113 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 LifP09056 203 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 BpgmP15327 259 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 SqleP52019 572 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Gabrr2P56476 465 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Gabrb3P63080 473 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Arnt2Q61324 712 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Chi3l1Q61362 389 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Atp2a3Q64518 1038 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 ProcrQ64695 242 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Nlrp9cQ66X01 1004 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Tmem74Q8BQU7 305 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Pggt1bQ8BUY9 377 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 TbcdQ8BYA0 1196 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Mta1Q8K4B0 715 aaKnown RBP16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Irx5Q9JKQ4 484 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 NagaQ9QWR8 415 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 PodxlQ9R0M4 503 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Ap4b1Q9WV76 738 aa16.03■□□□□ 0.16
Trim39-203ENSMUST00000113706 Olfr600E9PUN7 314 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 Pik3cdO35904 1043 aa16.02■□□□□ 0.16
Trim39-203ENSMUST00000113706 AlplP09242 524 aa16.02■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 101.9 ms