RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Per3O70361 1113 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 GlulP15105 373 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Msh2P43247 935 aaKnown RBP21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Sult1d1Q3UZZ6 295 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Q3V0E1 1183 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Spata48Q5NC83 441 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Arl13bQ640N2 427 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Otop2Q80SX5 563 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 SnphQ80U23 495 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Usp27Q8CEG8 438 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Exoc2Q9D4H1 924 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Aldh1a3Q9JHW9 512 aa21.41■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Jbts17Q8CE72 3214 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 6720489N17RikA0A1Y7VJW0 127 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Nlgn4lB0F2B4 945 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Lilra5D3Z7A9 295 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Znf683I7HJS4 458 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 AgxtO35423 414 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Slc22a2O70577 553 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Spp1P10923 294 aaKnown RBP21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Gsta4P24472 222 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 RxrbP28704 520 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Tmprss9P69525 1065 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Eml1Q05BC3 814 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 CpQ61147 1061 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Hif1aQ61221 836 aaKnown RBP21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Fam120bQ6RI63 786 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Proser2Q8C5R2 471 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Dedd2Q8QZV0 330 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 BfarQ8R079 450 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Hkdc1Q91W97 915 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Oas1cQ924S2 362 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Prpsap1Q9D0M1 356 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Mrps9Q9D7N3 390 aaKnown RBP21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Habp4Q9JKS5 411 aaKnown RBP21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 NagaQ9QWR8 415 aa21.4■■□□□ 1.02
Ccdc88a-202ENSMUST00000109477 Kcnj2P35561 428 aa21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Kpna2P52293 529 aaKnown RBP21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Slc22a16Q497L8 649 aa21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Otol1Q4ZJM7 482 aa21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Heatr9Q5QNV8 569 aa21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Wee2Q66JT0 555 aa21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Rbm12b1Q80YR9 836 aaKnown RBP21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Fem1cQ8CEF1 617 aa21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Olfr342Q8VGK7 312 aa21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Mark1Q8VHJ5 795 aa21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 XpotQ9CRT8 963 aa21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 4930524N10RikQ9D519 233 aa21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Necab3Q9D6J4 353 aa21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 PllpQ9DCU2 182 aa21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Krt7Q9DCV7 457 aa21.39■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Vmn2r10K7N621 847 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Gp1baO35930 734 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Aldh1a7O35945 501 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 RhoP15409 348 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Mrps6P58064 125 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 ErgP81270 486 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ccdc185Q3V118 621 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 SnrpaQ62189 287 aaKnown RBP21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Cox14Q8BH51 57 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Cgrrf1Q8BMJ7 332 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Sh3rf2Q8BZT2 735 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Spp2Q8K1I3 203 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Appl1Q8K3H0 707 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Lrrc17Q9CXD9 443 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Msh5Q9QUM7 833 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Rnf4Q9QZS2 194 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 PygmQ9WUB3 842 aaKnown RBP21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Cldn3Q9Z0G9 219 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Vmn2r25W4VSP2 855 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Gm12248A0A1W2P8B8 313 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 A0A286YCD0 109 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Prrg1A2BFE8 218 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ism2D3Z6A3 493 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 HcrtO55241 130 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 P01673 111 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Smad1P70340 465 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Fam131bQ3TY60 332 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Tmem255bQ5FW56 369 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 MslnQ61468 625 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Creb3Q61817 404 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 DgkqQ6P5E8 934 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Insig1Q8BGI3 259 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ccdc68Q8BVC4 333 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Def6Q8C2K1 630 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Gfm2Q8R2Q4 779 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 PpanQ91YU8 470 aaKnown RBP21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Tcf7l2Q924A0 459 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Tmem80Q9D3H0 123 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Pi16Q9ET66 489 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Il20Q9JKV9 176 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 EcsitQ9QZH6 435 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Fhl5Q9WTX7 284 aa21.38■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Dhx35A2ACQ1 703 aaKnown RBP21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Itpripl1A2ASA8 547 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Gm13285B1AYI3 182 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Gm13275B1AYI8 182 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Ccdc188F6WEU2 249 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 Hcn2O88703 863 aa21.37■■□□□ 1.01
Ccdc88a-202ENSMUST00000109477 CkmP07310 381 aa21.37■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms