RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 MipP51180 263 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 GmpsQ3THK7 693 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Hdgfl2Q3UMU9 669 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Mib1Q80SY4 1006 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Acap1Q8K2H4 740 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Kctd5Q8VC57 234 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Pcdhac1Q91Y10 964 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Vmn2r72D3Z4N8 856 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Cdh19E9Q3A7 770 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Mfsd14aP70187 490 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Smad1P70340 465 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Tapt1Q4VBD2 564 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Ssxb3Q6XAS4 170 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Pgrmc2Q80UU9 217 aaKnown RBP10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Asb11Q9CQ31 323 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Zcchc12Q9CZA5 402 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 UqcrbQ9D855 111 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Klhl4B1AZR0 717 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Nudcd1Q6PIP5 582 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Vmp1Q99KU0 406 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Cyp2c55Q9D816 490 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Fam96aQ9DCL2 160 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Tsc22d3Q9Z2S7 137 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 PfklP12382 780 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Gm4951Q3UED7 406 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Dnaaf3Q3UYV8 586 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Efhc2Q9D485 750 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Iigp1Q9QZ85 413 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Mbd2Q9Z2E1 414 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Golga4Q91VW5 2238 aa10.53□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Serpine3E9Q6A2 401 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Usp17ldG5E8G2 545 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Usp17lcG5E8I7 545 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Epb41l4aP52963 686 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Q32M26 199 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Tespa1Q3U132 458 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Slc15a2Q9ES07 729 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Vmn2r70K7N702 854 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Nos2P29477 1144 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Sstr3P30935 428 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 AcadsQ07417 412 aaKnown RBP10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Cox10Q8CFY5 443 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Actr3Q99JY9 418 aaKnown RBP10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Tspan3Q9QY33 253 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Dnajb2Q9QYI5 324 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 IppP28575 584 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Klhl6Q6V595 619 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Mcoln3Q8R4F0 553 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Olfr449Q8VGW8 311 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Taf1dQ9D4V4 322 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 4930524N10RikQ9D519 233 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Prg3Q9JL95 222 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Vav3Q9R0C8 847 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Arid3bQ9Z1N7 568 aa10.52□□□□□ -0.72
Scn8a-201ENSMUST00000082209 Tjp1P39447 1745 aaKnown RBP10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hist1h2abC0HKE1 130 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hist1h2acC0HKE2 130 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hist1h2adC0HKE3 130 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hist1h2aeC0HKE4 130 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hist1h2agC0HKE5 130 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hist1h2aiC0HKE6 130 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hist1h2anC0HKE7 130 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hist1h2aoC0HKE8 130 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hist1h2apC0HKE9 130 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Cyp2d10P24456 504 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Nckap1P28660 1128 aaKnown RBP10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Gm11437Q5QR91 290 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Antxr2Q6DFX2 487 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hist3h2aQ8BFU2 130 aaKnown RBP10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hist1h2afQ8CGP5 130 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hist1h2ahQ8CGP6 128 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hist1h2akQ8CGP7 130 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 H2afjQ8R1M2 129 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Pcdhb3Q91XZ7 784 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Necab2Q91ZP9 389 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Reep3Q99KK1 254 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Acbd7Q9D258 88 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Klrc2Q9WTJ9 238 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Abca3Q8R420 1704 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Gm44511A0A0N4SW10 223 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Capn6O35646 641 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Itga2Q62469 1178 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Msantd2Q6NZR2 559 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Lrrc71Q9D3W5 558 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Gm17175E9Q528 179 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Glyatl3E9Q5L8 290 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Tgm3Q08189 693 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Khdc4Q3TCX3 612 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Colgalt2Q6NVG7 625 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Zbtb44Q8R0A2 453 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Smg8Q8VE18 991 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Spg21Q9CQC8 308 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Igdcc4Q9EQS9 1252 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Hey2Q9QUS4 339 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Scgb2b12S4R2L0 112 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Nipsnap3aB1AWZ3 247 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 PtproE9Q612 1226 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 Ccnb1P24860 430 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 AmhP27106 555 aa10.52□□□□□ -0.73
Scn8a-201ENSMUST00000082209 DgkqQ6P5E8 934 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms