RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Fip1l1Q9D824 581 aaKnown RBP16.17■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Lrrc46Q9DAP0 323 aa16.17■□□□□ 0.18
Ckap4-201ENSMUST00000053871 VapbQ9QY76 243 aaKnown RBP16.17■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Slc2a5Q9WV38 501 aa16.17■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Sh2d4bA6X942 431 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 IkbkgO88522 412 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 YwhahP68510 246 aaKnown RBP16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Caprin1Q60865 707 aaKnown RBP16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 GpamQ61586 827 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Tdpoz3Q717B4 365 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Far2Q7TNT2 515 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Sytl5Q80T23 753 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Tma16Q9CR02 221 aaKnown RBP16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Wars2Q9CYK1 360 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 CinpQ9D0V8 212 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Prorsd1Q9D820 169 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 1700080O16RikQ9D9G4 284 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Copg1Q9QZE5 874 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Cdh13Q9WTR5 714 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Znf518bB2RRE4 1077 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Cyp2b23E9Q593 491 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Camk4P08414 469 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 PpargP37238 505 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Lsmem1Q3UQS2 128 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 KrtdapQ3V2T4 102 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Arcn1Q5XJY5 511 aaKnown RBP16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Kiaa1841Q68FF0 718 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Kctd13Q8BGV7 329 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Bmt2Q8BXK4 403 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Anapc2Q8BZQ7 837 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Wwp1Q8BZZ3 918 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Ccdc90bQ8C3X2 256 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Tmem154Q8C4Q9 181 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Gprc5bQ923Z0 410 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Cdkn2aipnlQ9D211 116 aaKnown RBP16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 DtnaQ9D2N4 746 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 MkksQ9JI70 570 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Myo16Q5DU14 1919 aa16.16■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Slc6a21A0A1B0GSD2 748 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Il12bP43432 335 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 GemP55041 295 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Lim2P56563 173 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Echdc2Q3TLP5 296 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Cyp2c66Q5GLZ0 490 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Rd3Q8BRE0 195 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 BoraQ8BS90 525 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Csnk1g1Q8BTH8 459 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 TdrpQ8C5P7 182 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Ndc80Q9D0F1 642 aaKnown RBP16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Tmem114Q9D563 222 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Vmn1r2A2AMT6 306 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 FgaE9PV24 789 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Vmn2r74E9PW21 853 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Gm3002E9PW72 216 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Hs3st1O35310 311 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 P01670 111 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 P01671 111 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 P01672 111 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 AldoaP05064 364 aaKnown RBP16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Dpy19l2P0CW70 773 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Pou5f1P20263 352 aaKnown RBP16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Rab17P35292 214 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Stat5aP42230 793 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Gucy2eP52785 1108 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Uba1Q02053 1058 aaKnown RBP16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Lrrc74bQ14BP6 391 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Pag1Q3U1F9 429 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Akr1clQ3UXL1 322 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Scube1Q6NZL8 1018 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Ckap2lQ7TS74 745 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Prkaa2Q8BRK8 552 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Zbtb6Q8K088 423 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Coq6Q8R1S0 476 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Pcdhb11Q91UZ8 797 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Pmf1Q9CPV5 202 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Ttc30bQ9CY00 664 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Atad1Q9D5T0 361 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Ten1Q9D7K2 161 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 D7h11orf16Q9JJR6 402 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Trpc7Q9WVC5 862 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Wdr49A0A0N4SUK7 710 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Ighg3A0A1Y7VJN6 399 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Supt3B0QZW4 406 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 2610008E11RikG3X964 669 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 NfkbieO54910 364 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 WapP01173 134 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Prim2P33610 505 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Hmx2P43687 273 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 LmnaP48678 665 aaKnown RBP16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 AtminQ6P9S1 818 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Sarm1Q6PDS3 724 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Olfr1198Q7TR12 308 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Rnf38Q8BI21 518 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Abraxas1Q8BPZ8 407 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Pgm2l1Q8CAA7 621 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 H2-Q4Q8HWB2 354 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Nsl1Q8K305 281 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Vps39Q8R5L3 886 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Catsper1Q91ZR5 686 aa16.15■□□□□ 0.18
Ckap4-201ENSMUST00000053871 Efcab9Q9DAM2 216 aa16.15■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms