RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Lta4hP24527 611 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Magea3Q6T340 320 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ints7Q7TQK1 966 aaKnown RBP16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Tma7Q8K003 64 aaKnown RBP16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Vmn1r64Q8R2B8 320 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Tdrd3Q91W18 743 aaKnown RBP16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Nacc2Q9DCM7 586 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Wdr61Q9ERF3 305 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 GnmtQ9QXF8 293 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Suv39h1O54864 412 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rab10P61027 200 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Serpina11Q8CIE0 424 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Pcdhgb1Q91XX8 918 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Prelid3bQ9CYY7 195 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ubiad1Q9DC60 336 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Hsd17b7O88736 334 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Grin2cQ01098 1239 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Xkr9Q5GH62 373 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Glis3Q6XP49 780 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Aldh4a1Q8CHT0 562 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Aqp5Q9WTY4 265 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Slfn14V9GXG1 899 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rgs5O08850 181 aa16.71■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ugt2a2Q6PDD0 528 aa16.71■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gm6377Q8BHV4 303 aa16.71■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gulp1Q8K2A1 304 aa16.71■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Vars2Q3U2A8 1060 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fbxw10Q5SUS0 1030 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Bcl2l1Q64373 233 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cyp2d12Q8BVD2 504 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Rgs18Q99PG4 235 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Commd8Q9CZG3 183 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Elp3Q9CZX0 547 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fam227aQ9D3V8 625 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Vmn2r73D3Z7M3 851 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Eif2b4Q61749 524 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gstm4Q8R5I6 218 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Pmf1Q9CPV5 202 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 AenQ9CZI9 336 aaKnown RBP16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Dgcr6O35347 198 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 AcadmP45952 421 aaKnown RBP16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Psme3P61290 254 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Epha2Q03145 977 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Atp13a4Q5XF90 1193 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Arnt2Q61324 712 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tgfbr2Q62312 592 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Sult1c1Q80VR3 304 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Mst1rQ62190 1378 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Xrn1P97789 1719 aaKnown RBP16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Dnaaf3Q3UYV8 586 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Opa3Q505D7 179 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Dph1Q5NCQ5 438 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Pkn3Q8K045 878 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Zmynd11Q8R5C8 602 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cops7aQ9CZ04 275 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fkbp8O35465 402 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Sstr1P30873 391 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ppp3cbP48453 525 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tbc1d10aP58802 500 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tmem169Q8BG50 297 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Rab15Q8K386 212 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Syde1Q9DBZ9 737 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Zfp969A2ART2 485 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Zfp973A2BE20 318 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 IppP28575 584 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 AccsA2AIG8 502 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 AcadsQ07417 412 aaKnown RBP16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Klrb1Q0ZUP1 214 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 HpseQ6YGZ1 535 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Vac14Q80WQ2 782 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Cxcl16Q8BSU2 246 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 PrkxQ922R0 355 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 MtpapQ9D0D3 585 aaKnown RBP16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Mup18A2BIM8 181 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Mup11P04938 181 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gm21320Q4FZE8 181 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tbx2Q60707 711 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Lztr1Q9CQ33 837 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Ptdss2Q9Z1X2 473 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gria4Q9Z2W8 902 aa16.7■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Zc3h7aE9PWW6 970 aaKnown RBP16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gm6811E9Q3Y8 510 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Gm8374L7N2A9 172 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Map2k3O09110 347 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Stra6O70491 670 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 DgkaO88673 730 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Teddm2Q208S0 260 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Susd6Q8BGE4 302 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Phf10Q9D8M7 497 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Nek10Q3UGM2 1111 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tmem39bQ810L4 492 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Zdhhc15Q8BGJ0 337 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tcaf1Q8BNE1 924 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Clip4Q8CI96 704 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Fbxo21Q8VDH1 627 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 OmpQ64288 163 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Pcdhga9Q91XX9 932 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 SelenosQ9BCZ4 190 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Mss51Q9D5Z5 446 aa16.69■□□□□ 0.26
Ccdc88a-201ENSMUST00000040182 Tcirg1Q9JHF5 834 aa16.69■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms