RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Tas2r106Q7M724 308 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Cgrrf1Q8BMJ7 332 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ugt2b34Q8K154 532 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Fbxw7Q8VBV4 629 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 GcshQ91WK5 170 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Depdc7Q91WS7 511 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Eif2b2Q99LD9 351 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Slc13a2Q9ES88 586 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 NfkbizQ9EST8 728 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Olfr1160A2AVT0 319 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 MndalD0QMC3 538 aaKnown RBP11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Cntnap3E9PY62 1287 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 XntrpcF8VQM8 1264 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 BmxP97504 651 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ntrk1Q3UFB7 799 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ankrd27Q3UMR0 1048 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gpr65Q61038 337 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 GapdhsQ64467 440 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tas2r125Q7M710 311 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Hsdl1Q8BTX9 330 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 BicralQ8CHH5 1074 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ddx1Q91VR5 740 aaKnown RBP11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 DenrQ9CQJ6 198 aaKnown RBP11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Bcas2Q9D287 225 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Vps35Q9EQH3 796 aaKnown RBP11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ndel1Q9ERR1 345 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Spag4Q9JJF2 443 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 QkiQ9QYS9 341 aaKnown RBP11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Alms1Q8K4E0 3251 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ighv11-2A0A075B5R8 117 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Prrt4B2RU40 902 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Pgbd1E9Q492 415 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Neu1O35657 409 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Slc2a3P32037 493 aaKnown RBP11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Sat1P48026 171 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Pecam1Q08481 727 aaKnown RBP11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Fam91a1Q3UVG3 837 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Slc22a19Q8VCA0 551 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Evi2bQ8VD58 444 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Lrrc18Q9CQ07 262 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Idh3aQ9D6R2 366 aaKnown RBP11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Olfr703Q9EPF5 319 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Disp2Q8CIP5 1345 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Dthd1E9PZX1 795 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Bnc1O35914 961 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 MafbP54841 323 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Mc4rP56450 332 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Rab10P61027 200 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Rnf157Q3TEL6 685 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gm5800Q497L3 186 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Flot2Q60634 428 aaKnown RBP11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Fam214aQ69ZK7 1075 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Wdr59Q8C0M0 992 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 DhddsQ99KU1 333 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Trpc4apQ9JLV2 797 aa11.42□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Olfr625-ps1A0A140T8L4 321 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ptchd4B9EKX1 904 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Mkrn2osD3Z393 217 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Il4i1O09046 630 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Jak1P52332 1153 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Traf6P70196 530 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Pcgf5Q3UK78 256 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Rxfp1Q6R6I7 758 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 TxlngQ8BHN1 524 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Frs2Q8C180 508 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Impg1Q8R1W8 798 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Olfr617Q8VGA1 318 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tfap2dQ91ZK0 452 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Asb7Q91ZU0 318 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Anxa13Q99JG3 317 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ten1Q9D7K2 161 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 RhojQ9ER71 214 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Cacng4Q9JJV4 327 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Map3k14Q9WUL6 942 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Kndc1Q0KK55 1742 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Chrna4O70174 629 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gsta1P13745 223 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Slc6a13P31649 602 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Afap1l2Q5DTU0 825 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Tmem45aQ60774 273 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Trpc1Q61056 793 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gsta1Q6P8Q0 223 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Dna2Q6ZQJ5 1062 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Abcg2Q7TMS5 657 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Pnma2Q8BHK0 365 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Pgm2l1Q8CAA7 621 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Cdhr5Q8VHF2 831 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 PrkxQ922R0 355 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ctu1Q99J10 420 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Ifi44lQ9BDB7 447 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Mia3Q8BI84 1930 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Gm7086A0A1W2P766 342 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Mybpc1D3YU50 1127 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Pole2O54956 527 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Svs4P18419 113 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Mbl1P39039 239 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 SirpaP97797 513 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Cacna1sQ02789 1880 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 Oog3Q3UWY1 500 aa11.41□□□□□ -0.58
Topbp1-201ENSMUST00000035164 G2e3Q5RJY2 716 aa11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 65.2 ms