RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Wwp2Q9DBH0 870 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Panx1Q9JIP4 426 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 ChmlQ9QZD5 621 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Tll2Q9WVM6 1012 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Htr5bP31387 370 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Dnajb14Q149L6 379 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Mfhas1Q3V1N1 1048 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Znf821Q6PD05 413 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Tbx10Q810F8 385 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Rbm4Q8C7Q4 361 aaKnown RBP23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Rbm4bQ8VE92 357 aaKnown RBP23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Vps4aQ8VEJ9 437 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Lgals12Q91VD1 314 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Eif2b4Q61749 524 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Tll1Q62381 1013 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Gdpd5Q640M6 607 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Sez6lQ6P1D5 963 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Hdac7Q8C2B3 938 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 MispQ9D279 648 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 PolkQ9QUG2 852 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Xlr5aA2BI45 236 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Pdia2D3Z6P0 527 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 TnfP06804 235 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Epha3P29319 983 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Tcaf3Q6QR59 914 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 RtknQ8C6B2 564 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Mrpl9Q99N94 265 aaKnown RBP23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Kctd4Q9D7X1 259 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Ncf4P97369 339 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Q32M26 199 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Snx32Q80ZJ7 404 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Mospd1Q8VEL0 213 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Slc25a3Q8VEM8 357 aaKnown RBP23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Pcdhac1Q91Y10 964 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Clcn2Q9R0A1 908 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 VarsQ9Z1Q9 1263 aaKnown RBP23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Gm14781A2A9Q9 366 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 DseQ8BLI4 958 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Slc9a9Q8BZ00 644 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Nif3l1Q9EQ80 376 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 PrccQ9EQC8 491 aaKnown RBP23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Olfr564E9PWA8 316 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Fbxw9F8VPX2 458 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Fgfr2P21803 821 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Nudt2P56380 147 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Sema3cQ62181 751 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Rnaseh2aQ9CWY8 301 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Ift27Q9D0P8 186 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Il22bQ9JJY8 179 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Ing1Q9QXV3 279 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Vmn2r73D3Z7M3 851 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Cdk14O35495 469 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Olfr325Q5NCD2 326 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Tgoln2Q62314 363 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Lrrc4cQ8C031 640 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Kat5Q8CHK4 513 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Pnpla8Q8K1N1 776 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Cyp2c55Q9D816 490 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Armc8Q9DBR3 673 aa23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 PfkpQ9WUA3 784 aaKnown RBP23.3■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Olfr1305A2AVW3 312 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 SmoktcrA2KF29 484 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Gm5407E9Q7Q1 248 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Pla2g6P97819 807 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Pik3r6Q3U6Q4 756 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Slc29a2Q61672 456 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Exosc4Q921I9 245 aaKnown RBP23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Paqr5Q9DCU0 330 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Asap1Q9QWY8 1147 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Mroh1E0CZ22 1640 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Cyp2b9P12790 491 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Prdx3P20108 257 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Phf23Q8BSN5 401 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Pcdhb6Q91XZ4 772 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Pramel1Q99MW3 458 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 H2bfmQ9DAB5 224 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 DcnP28654 354 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Plekhf1Q3TB82 279 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Plppr4Q7TME0 766 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Slco1a5Q91YY5 670 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Ecrg4Q99LS0 148 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Pih1d1Q9CQJ2 290 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Fam83dQ9D7I8 585 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Akr1c12Q9JLI0 323 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Rps6ka3P18654 740 aaKnown RBP23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 TankP70347 448 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Cdkl4Q3TZA2 342 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Tas2r104Q7M723 302 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Ing4Q8C0D7 249 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Slc24a3Q99PD7 645 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Ddi1Q9DAF3 408 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Gm2888K7N746 267 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Slc6a2O55192 617 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Ly9Q01965 654 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Zdhhc24Q6IR37 284 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Nemp1Q6ZQE4 437 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Olfr784Q8VFZ9 319 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Q9CXL3 195 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Tmbim6Q9D2C7 237 aa23.29■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Q9D4A5 307 aa23.29■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms