RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 FBXO5Q9UKT4 447 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 SLC12A8A0AV02 714 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 HEATR9A2RTY3 570 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 DRGXA6NNA5 263 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 TM7SF2O76062 418 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 CPOXP36551 454 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 SLC11A1P49279 550 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 SERPINH1P50454 418 aaKnown RBP17.25■□□□□ 0.35
PHGDH-211ENST00000641213 MXRA7P84157 204 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 DSC2Q02487 901 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 GPR17Q13304 367 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 MSLNQ13421 630 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-211ENST00000641213 MGAT5BQ3V5L5 792 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 CFAP157Q5JU67 520 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 LRRC8EQ6NSJ5 796 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 NEPROQ6NW34 567 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 SCUBE1Q8IWY4 988 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 TEX26Q8N6G2 289 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 DBF4BQ8NFT6 615 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 SPPL2BQ8TCT7 592 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 MAPK15Q8TD08 544 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 ELMO2Q96JJ3 720 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 SPATA17Q96L03 361 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 ZNF570Q96NI8 536 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 RANBP9Q96S59 729 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 SEPT5Q99719 369 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-211ENST00000641213 DRC3Q9H069 523 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 ACSS2Q9NR19 701 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 CHRNGP07510 517 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 CRABP2P29373 138 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 GRIA4P48058 902 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 CD151P48509 253 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 PRKAA2P54646 552 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 TAS2R39P59534 338 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 DLG1Q12959 904 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 SLC9B1Q4ZJI4 515 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 SNX30Q5VWJ9 437 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 ARMC3Q5W041 872 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 CIR1Q86X95 450 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-211ENST00000641213 ZNF354CQ86Y25 554 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 GIMAP7Q8NHV1 300 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 NXNL1Q96CM4 212 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 RSRC1Q96IZ7 334 aaKnown RBP17.24■□□□□ 0.35
PHGDH-211ENST00000641213 THTPAQ9BU02 230 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 ILKAPQ9H0C8 392 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-211ENST00000641213 TTC24A2A3L6 582 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-211ENST00000641213 MEI4A8MW99 385 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 AURKAO14965 403 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 TBC1D4O60343 1298 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 KRT36O76013 467 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 PSMG1O95456 288 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 INHAP05111 366 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 NCF2P19878 526 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-211ENST00000641213 PTDSS1P48651 473 aaKnown RBP17.24■□□□□ 0.35
PHGDH-211ENST00000641213 TNK2Q07912 1038 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 RCN1Q15293 331 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 RTP2Q5QGT7 225 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 TSTD2Q5T7W7 516 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 FUT10Q6P4F1 479 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.24■□□□□ 0.355e-6■■■■■ 81.8
PHGDH-211ENST00000641213 ULK2Q8IYT8 1036 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 PGBD5Q8N414 524 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 POU5F2Q8N7G0 328 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 GPATCH11Q8N954 259 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 CFAP61Q8NHU2 1237 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 AGR3Q8TD06 166 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 CLPTM1LQ96KA5 538 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 RPRD1AQ96P16 312 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-211ENST00000641213 CCSER2Q9H7U1 834 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 RAP2CQ9Y3L5 183 aa17.24■□□□□ 0.35
PHGDH-211ENST00000641213 NT5C1B-RDH14C9J2C7 533 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 MPSTP25325 297 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 CCR10P46092 362 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 POU4F1Q01851 419 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 RING1Q06587 406 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 IL10RBQ08334 325 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 SERINC3Q13530 473 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 POLD3Q15054 466 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-211ENST00000641213 CNSTQ6PJW8 725 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 KIAA0408Q6ZU52 694 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 NET1Q7Z628 596 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-211ENST00000641213 SPATA6LQ8N4H0 392 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 ARRDC2Q8TBH0 407 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 MYEOVQ96EZ4 313 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 MAN1C1Q9NR34 630 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 XPR1Q9UBH6 696 aa17.23■□□□□ 0.35
PHGDH-211ENST00000641213 DLX3O60479 287 aa17.22■□□□□ 0.35
PHGDH-211ENST00000641213 RAMP2O60895 175 aa17.22■□□□□ 0.35
PHGDH-211ENST00000641213 NAGLUP54802 743 aa17.22■□□□□ 0.35
PHGDH-211ENST00000641213 DUSP4Q13115 394 aa17.22■□□□□ 0.35
PHGDH-211ENST00000641213 ZNF789Q5FWF6 425 aa17.22■□□□□ 0.35
PHGDH-211ENST00000641213 NADSYN1Q6IA69 706 aa17.22■□□□□ 0.35
PHGDH-211ENST00000641213 OR13J1Q8NGT2 312 aa17.22■□□□□ 0.35
PHGDH-211ENST00000641213 TADA1Q96BN2 335 aa17.22■□□□□ 0.35
PHGDH-211ENST00000641213 ANKRD27Q96NW4 1050 aa17.22■□□□□ 0.35
PHGDH-211ENST00000641213 OMDQ99983 421 aa17.22■□□□□ 0.35
PHGDH-211ENST00000641213 HMX1Q9NP08 348 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-211ENST00000641213 COMMD8Q9NX08 183 aa17.22■□□□□ 0.35
PHGDH-211ENST00000641213 LRRC42Q9Y546 428 aa17.22■□□□□ 0.35
PHGDH-211ENST00000641213 A0A087X1B8 175 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms