RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 RPP40O75818 363 aaKnown RBP13.36□□□□□ -0.27
GTF3A-209ENST00000640289 PTPN5P54829 565 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 NIPAL4Q0D2K0 466 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 CNTN1Q12860 1018 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 IHHQ14623 411 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 TEX44Q53QW1 395 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 NCEH1Q6PIU2 408 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 GDPD4Q6W3E5 623 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.36□□□□□ -0.27
GTF3A-209ENST00000640289 PARS2Q7L3T8 475 aaKnown RBP13.36□□□□□ -0.27
GTF3A-209ENST00000640289 CDKL3Q8IVW4 592 aaPredicted RBP13.36□□□□□ -0.27
GTF3A-209ENST00000640289 SLC35B2Q8TB61 432 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 ARRDC2Q8TBH0 407 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 GAB3Q8WWW8 586 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 ATOH1Q92858 354 aaPredicted RBP13.36□□□□□ -0.27
GTF3A-209ENST00000640289 LRIG1Q96JA1 1093 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 KLHL32Q96NJ5 620 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 AGAP3Q96P47 875 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 SEMA3CQ99985 751 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 CPEB1Q9BZB8 566 aaKnown RBP13.36□□□□□ -0.27
GTF3A-209ENST00000640289 POLR1EQ9GZS1 481 aaKnown RBP13.36□□□□□ -0.27
GTF3A-209ENST00000640289 KCNH6Q9H252 994 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 NEUROG2Q9H2A3 272 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 NOD2Q9HC29 1040 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 SCUBE2Q9NQ36 999 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 WSB2Q9NYS7 404 aaPredicted RBP13.36□□□□□ -0.27
GTF3A-209ENST00000640289 DNPEPQ9ULA0 475 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 SCML1Q9UN30 329 aa13.36□□□□□ -0.27
GTF3A-209ENST00000640289 BCLAF3A2AJT9 711 aaKnown RBP13.35□□□□□ -0.27
GTF3A-209ENST00000640289 CTAGE9A4FU28 777 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 F5H423 210 aaPredicted RBP13.35□□□□□ -0.27
GTF3A-209ENST00000640289 KCNN4O15554 427 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 LIASO43766 372 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 IGLV3-19P01714 112 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 CD6P30203 668 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 ACSL1P33121 698 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 CD68P34810 354 aaPredicted RBP13.35□□□□□ -0.27
GTF3A-209ENST00000640289 GDF10P55107 478 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 AP1S1P61966 158 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 SNX1Q13596 522 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 PAPD7Q5XG87 772 aaKnown RBP13.35□□□□□ -0.27
GTF3A-209ENST00000640289 ALG1LQ6GMV1 187 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 SYT10Q6XYQ8 523 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 NYAP1Q6ZVC0 841 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 USP30Q70CQ3 517 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 ZNF567Q8N184 647 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 DEFB119Q8N690 84 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 TOE1Q96GM8 510 aaKnown RBP13.35□□□□□ -0.27
GTF3A-209ENST00000640289 PPP1R16AQ96I34 528 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 SPACA7Q96KW9 195 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 TEKT5Q96M29 485 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 C16orf45Q96MC5 204 aaPredicted RBP13.35□□□□□ -0.27
GTF3A-209ENST00000640289 TUBGCP5Q96RT8 1024 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 TMEM121Q9BTD3 319 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 SUV39H2Q9H5I1 410 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 USP29Q9HBJ7 922 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 DYRK4Q9NR20 520 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 KLHL8Q9P2G9 620 aaPredicted RBP13.35□□□□□ -0.27
GTF3A-209ENST00000640289 AMACRQ9UHK6 382 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 NCKAP1Q9Y2A7 1128 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 PCDHGC4Q9Y5F7 938 aa13.35□□□□□ -0.27
GTF3A-209ENST00000640289 C16orf96A6NNT2 1141 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 TRAFD1O14545 582 aaPredicted RBP13.34□□□□□ -0.27
GTF3A-209ENST00000640289 MTSS1O43312 755 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 MMP2P08253 660 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 TCP1P17987 556 aaKnown RBP13.34□□□□□ -0.27
GTF3A-209ENST00000640289 ITGB7P26010 798 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 ETF1P62495 437 aaKnown RBP13.34□□□□□ -0.27
GTF3A-209ENST00000640289 BCL2L1Q07817 233 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 TRAF2Q12933 501 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 BYSLQ13895 437 aaKnown RBP13.34□□□□□ -0.27
GTF3A-209ENST00000640289 GRM3Q14832 879 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 OASLQ15646 514 aaKnown RBP13.34□□□□□ -0.27
GTF3A-209ENST00000640289 ZNF805Q5CZA5 627 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 LRRC73Q5JTD7 316 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 PIP5KL1Q5T9C9 394 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 AGBL4Q5VU57 503 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 ERN2Q76MJ5 926 aaKnown RBP13.34□□□□□ -0.27
GTF3A-209ENST00000640289 CEP68Q76N32 757 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 PID1Q7Z2X4 250 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 KBTBD6Q86V97 674 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 ZSWIM9Q86XI8 627 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 MAIP1Q8WWC4 291 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 FAM131CQ96AQ9 280 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 GPR174Q9BXC1 333 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 OSBPL1AQ9BXW6 950 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 BTBD1Q9H0C5 482 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 ATP13A3Q9H7F0 1226 aa13.34□□□□□ -0.27
GTF3A-209ENST00000640289 TTC7AQ9ULT0 858 aaPredicted RBP13.34□□□□□ -0.27
GTF3A-209ENST00000640289 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.33□□□□□ -0.28
GTF3A-209ENST00000640289 FAM47DPA6NHR8 397 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 PGRMC1O00264 195 aaKnown RBP13.33□□□□□ -0.28
GTF3A-209ENST00000640289 CES2O00748 559 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 MAP3K13O43283 966 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 PRKCGP05129 697 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 ADRB3P13945 408 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 ITIH2P19823 946 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 NFKB1P19838 968 aa13.33□□□□□ -0.28
GTF3A-209ENST00000640289 SERPINA4P29622 427 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms