RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 FAM72AQ5TYM5 149 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 NUGGCQ68CJ6 796 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 FAM72DQ6L9T8 149 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 ANKRD54Q6NXT1 300 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 SYCE2Q6PIF2 218 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 ZNF572Q7Z3I7 529 aaPredicted RBP8.17□□□□□ -1.1
SCARB2-220ENST00000640076 VN1R5Q7Z5H4 357 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 FAM72BQ86X60 149 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 MAB21L3Q8N8X9 362 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 GPBAR1Q8TDU6 330 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 FAF2Q96CS3 445 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 BTN2A3PQ96KV6 586 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 RIPOR3Q96MK2 946 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 NAP1L3Q99457 506 aaPredicted RBP8.17□□□□□ -1.1
SCARB2-220ENST00000640076 ZNF670Q9BS34 389 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 CARD6Q9BX69 1037 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 HEMGNQ9BXL5 484 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 SLC46A2Q9BY10 475 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 GKN1Q9NS71 199 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 SMPD4Q9NXE4 827 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 CWC15Q9P013 229 aaKnown RBP8.17□□□□□ -1.1
SCARB2-220ENST00000640076 RCOR3Q9P2K3 495 aaPredicted RBP8.17□□□□□ -1.1
SCARB2-220ENST00000640076 OR12D3Q9UGF7 316 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 TTLL3Q9Y4R7 772 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 SNX10Q9Y5X0 201 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 HELZP42694 1942 aaKnown RBP8.16□□□□□ -1.1
SCARB2-220ENST00000640076 TRAV19A0A0A6YYK7 116 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 SOBPA7XYQ1 873 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 H3BRJ5 948 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 STC2O76061 302 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 MOCS2O96007 188 aaPredicted RBP8.16□□□□□ -1.1
SCARB2-220ENST00000640076 GLULP15104 373 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 GOT1P17174 413 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 HOXB8P17481 243 aaPredicted RBP8.16□□□□□ -1.1
SCARB2-220ENST00000640076 DDX6P26196 483 aaKnown RBP eCLIP8.16□□□□□ -1.1
SCARB2-220ENST00000640076 GGCXP38435 758 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 ARL4AP40617 200 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 SLC7A9P82251 487 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 ZXDBP98169 803 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 SF1Q15637 639 aaKnown RBP8.16□□□□□ -1.1
SCARB2-220ENST00000640076 ARHGAP15Q53QZ3 475 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 ARTNQ5T4W7 220 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 KAZNQ674X7 775 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 SYDE1Q6ZW31 735 aaPredicted RBP8.16□□□□□ -1.1
SCARB2-220ENST00000640076 BBS12Q6ZW61 710 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 ADAT2Q7Z6V5 191 aaKnown RBP8.16□□□□□ -1.1
SCARB2-220ENST00000640076 GPR149Q86SP6 731 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 UNC45BQ8IWX7 931 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 ZDHHC14Q8IZN3 488 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 CEP112Q8N8E3 955 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 ARL10Q8N8L6 244 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 ATP6V0D2Q8N8Y2 350 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 PCDH19Q8TAB3 1148 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 MRGPRX2Q96LB1 330 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 C1orf74Q96LT6 269 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 CSPG4P5Q96PW8 444 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 RNF157Q96PX1 679 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 VPS11Q9H270 941 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 TASP1Q9H6P5 420 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 CLEC1BQ9P126 229 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 SLC12A6Q9UHW9 1150 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 ADAM30Q9UKF2 790 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 NR2E1Q9Y466 385 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 CPQQ9Y646 472 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 HS3ST4Q9Y661 456 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 CLUHO75153 1309 aa8.16□□□□□ -1.1
SCARB2-220ENST00000640076 KRIT1O00522 736 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 AQP7O14520 342 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 TMCC2O75069 709 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 TBX10O75333 385 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 LRIG2O94898 1065 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 TJP3O95049 919 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 KLKB1P03952 638 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 CEBPBP17676 345 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 HARS2P49590 506 aaKnown RBP8.15□□□□□ -1.1
SCARB2-220ENST00000640076 ZNF135P52742 658 aaPredicted RBP8.15□□□□□ -1.1
SCARB2-220ENST00000640076 MLLT6P55198 1093 aaPredicted RBP8.15□□□□□ -1.1
SCARB2-220ENST00000640076 NRG1Q02297 640 aaPredicted RBP8.15□□□□□ -1.1
SCARB2-220ENST00000640076 ITIH3Q06033 890 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 DPYSQ14117 519 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 SIX1Q15475 284 aaPredicted RBP8.15□□□□□ -1.1
SCARB2-220ENST00000640076 ANKRD20A8PQ5CZ79 823 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 MANEALQ5VSG8 457 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 AGAP9Q5VTM2 703 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 CMTM8Q8IZV2 173 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 PQLC3Q8N755 202 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 MNS1Q8NEH6 495 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 SPATA4Q8NEY3 305 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 ITFG1Q8TB96 612 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 WBP2Q969T9 261 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 SH3KBP1Q96B97 665 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 APOL5Q9BWW9 433 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 AP1M1Q9BXS5 423 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 SIK2Q9H0K1 926 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 PRDM6Q9NQX0 595 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 MRGBPQ9NV56 204 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 DCAF16Q9NXF7 216 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 B4GALT6Q9UBX8 382 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 NEU3Q9UQ49 428 aa8.15□□□□□ -1.1
SCARB2-220ENST00000640076 EMC9Q9Y3B6 208 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms