RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072		Q5PR19	223 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	ATAD3B	Q5T9A4	648 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	ANKS6	Q68DC2	871 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	LAYN	Q6UX15	382 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	DPPA2	Q7Z7J5	298 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	GPR149	Q86SP6	731 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	SETD3	Q86TU7	594 aa	Predicted RBP	6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	KBTBD6	Q86V97	674 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	TIGD4	Q8IY51	512 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	KIAA0319L	Q8IZA0	1049 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	KDF1	Q8NAX2	398 aa	Predicted RBP	6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	NCOA7	Q8NI08	942 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	ETNPPL	Q8TBG4	499 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	RSC1A1	Q92681	617 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	ESR2	Q92731	530 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	RANBP9	Q96S59	729 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	PABPC3	Q9H361	631 aa	Known RBP	6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	LIN7B	Q9HAP6	207 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	PNPLA8	Q9NP80	782 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	CRTAC1	Q9NQ79	661 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	SAR1A	Q9NR31	198 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	SLC35D1	Q9NTN3	355 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	UFSP2	Q9NUQ7	469 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	PLK2	Q9NYY3	685 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	TRMT6	Q9UJA5	497 aa	Known RBP	6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	MAGED2	Q9UNF1	606 aa	Predicted RBP	6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	TBC1D30	Q9Y2I9	924 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	SNX13	Q9Y5W8	968 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	WDR17	Q8IZU2	1322 aa		6.21	□□□□□ -1.41
NECAP1-222	ENST00000640072	PCDH11Y	Q9BZA8	1340 aa		6.21	□□□□□ -1.41
NECAP1-222	ENST00000640072	DENND3	A2RUS2	1198 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	MAFK	O60675	156 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	CYTIP	O60759	359 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	CD63	P08962	238 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	PRPS2	P11908	318 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	TIMP2	P16035	220 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	DSG3	P32926	999 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	CCR10	P46092	362 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	SERPINH1	P50454	418 aa	Known RBP	6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	GMFB	P60983	142 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	CYP24A1	Q07973	514 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	LMAN2	Q12907	356 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	SLC15A2	Q16348	729 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	KRT80	Q6KB66	452 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	NANOGP8	Q6NSW7	305 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	ZNF572	Q7Z3I7	529 aa	Predicted RBP	6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	MCOLN3	Q8TDD5	553 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	CA5BP1	Q8WTZ4	195 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	DEPDC1B	Q8WUY9	529 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	CKAP2	Q8WWK9	683 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	PTP4A1	Q93096	173 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	C7orf34	Q96L11	122 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	ZNF285	Q96NJ3	590 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	FAM111A	Q96PZ2	611 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	P2RX7	Q99572	595 aa	Known RBP	6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	CDC6	Q99741	560 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	ARHGAP39	Q9C0H5	1083 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	REXO4	Q9GZR2	422 aa	Known RBP	6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	USP44	Q9H0E7	712 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	DPEP3	Q9H4B8	488 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	SYTL2	Q9HCH5	934 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	TOR4A	Q9NXH8	423 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	IL19	Q9UHD0	177 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	HPSE	Q9Y251	543 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	CHKB	Q9Y259	395 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	hCG_1809904	A0A1W2PP81	198 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072		A0A1W2PPE2	198 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072		A0A1W2PR64	198 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	PSMD12	O00232	456 aa	Predicted RBP	6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	SNAPIN	O95295	136 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	DHFR	P00374	187 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	INHBA	P08476	426 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	IGFBP1	P08833	259 aa	Predicted RBP	6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	DLD	P09622	509 aa	Known RBP	6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	MCF2	P10911	925 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	GLRA2	P23416	452 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	AFM	P43652	599 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	AQP4	P55087	323 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	YWHAH	Q04917	246 aa	Predicted RBP	6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	PMS2P3	Q13401	168 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	ACVR2B	Q13705	512 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	PLCL1	Q15111	1095 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	RPS6KA1	Q15418	735 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	TNFAIP8L3	Q5GJ75	292 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	KRT79	Q5XKE5	535 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	LPCAT4	Q643R3	524 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	SLFN12L	Q6IEE8	588 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	C3orf33	Q6P1S2	294 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	PDSS2	Q86YH6	399 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	CMIP	Q8IY22	773 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	FAM109A	Q8N4B1	249 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	ATG4C	Q96DT6	458 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	CNOT6L	Q96LI5	555 aa	Known RBP	6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	COPS4	Q9BT78	406 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	THTPA	Q9BU02	230 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	SLC4A5	Q9BY07	1137 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	DDX47	Q9H0S4	455 aa	Known RBP	6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	RNPEP	Q9H4A4	650 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	ERVMER34-1	Q9H9K5	563 aa		6.21	□□□□□ -1.42
NECAP1-222	ENST00000640072	MAGEE1	Q9HCI5	957 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms