RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 CARTPTQ16568 116 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 C16orf87Q6PH81 154 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SYT10Q6XYQ8 523 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ADGRG2Q8IZP9 1017 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 RFFLQ8WZ73 363 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SHC3Q92529 594 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 FRMD8Q9BZ67 464 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 TTYH3Q9C0H2 523 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 WDR26Q9H7D7 661 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 TXNRD2Q9NNW7 524 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 GJB4Q9NTQ9 266 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 TRHDEQ9UKU6 1024 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 A8MUI8 341 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 CST8O60676 142 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 GALTP07902 379 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 PLEKP08567 350 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 AMPD1P23109 780 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 PTPN7P35236 360 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ABRQ12979 859 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 PDSS1Q5T2R2 415 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SV2AQ7L0J3 742 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SLC44A2Q8IWA5 706 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 LSMEM2Q8N112 164 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 CHTF18Q8WVB6 975 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 KAT2BQ92831 832 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ZNF669Q96BR6 464 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ARMC5Q96C12 935 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ZBTB45Q96K62 511 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 CLSTN3Q9BQT9 956 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 IRX2Q9BZI1 471 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 RSPH9Q9H1X1 276 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ZNF556Q9HAH1 456 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 FKBP14Q9NWM8 211 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 OGFRQ9NZT2 677 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 AGO1Q9UL18 857 aaKnown RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 NENFQ9UMX5 172 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 VPS4AQ9UN37 437 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ABCA4P78363 2273 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 GLI1P08151 1106 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 OR4Q2P0C623 313 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 TFPIP10646 304 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 S100A5P33763 92 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ARSEP51690 589 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 MRPS15P82914 257 aaKnown RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 CAPSQ13938 189 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 LRRC14Q15048 493 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 TSC22D1Q15714 1073 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 HIF1AQ16665 826 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 TRIM61Q5EBN2 209 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 CAPRIN2Q6IMN6 1127 aaKnown RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 HIBCHQ6NVY1 386 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 CNSTQ6PJW8 725 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 TXNDC5Q8NBS9 432 aaKnown RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 BCAS4Q8TDM0 211 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 MAP3K3Q99759 626 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 OR12D3Q9UGF7 316 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 RAPGEFL1Q9UHV5 662 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SOX13Q9UN79 622 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SNX7Q9UNH6 387 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 PCDHA13Q9Y5I0 950 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ZNF780BQ9Y6R6 833 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 UNC13CQ8NB66 2214 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 FAM86B1E9PN63 330 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 CCDC188H7C350 402 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 TNFRSF10AO00220 468 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 SLITRK3O94933 977 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 KRT6AP02538 564 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 KRT6BP04259 564 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 FAM86B2P0C5J1 330 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 CYBAP13498 195 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 EEF1B2P24534 225 aaKnown RBP5.06□□□□□ -1.6
SCN1A-218ENST00000640036 ITPKBP27987 946 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 NTSP30990 170 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 KRT6CP48668 564 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 PIK3CGP48736 1102 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 CCNG1P51959 295 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 TRIM32Q13049 653 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 CSHL1Q14406 222 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 ARHGAP40Q5TG30 622 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 PLXDC1Q8IUK5 500 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 CFAP52Q8N1V2 620 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 ZFP28Q8NHY6 868 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 UHMK1Q8TAS1 419 aaKnown RBP5.06□□□□□ -1.6
SCN1A-218ENST00000640036 CELF6Q96J87 481 aaKnown RBP5.06□□□□□ -1.6
SCN1A-218ENST00000640036 ZNF514Q96K75 400 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-218ENST00000640036 CNBD2Q96M20 576 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 C17orf80Q9BSJ5 609 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 FAM167BQ9BTA0 163 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 TAS2R13Q9NYV9 303 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 GNPTGQ9UJJ9 305 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 HPSEQ9Y251 543 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 CAPN7Q9Y6W3 813 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 MORC2Q9Y6X9 1032 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-218ENST00000640036 LRP6O75581 1613 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 A0A0A6YYK5 440 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-218ENST00000640036 KLRG2A4D1S0 409 aaPredicted RBP5.06□□□□□ -1.6
SCN1A-218ENST00000640036 OR5K4A6NMS3 321 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 TTLL8A6PVC2 850 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 LGALS16A8MUM7 142 aa5.06□□□□□ -1.6
SCN1A-218ENST00000640036 TAF4O00268 1085 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms