RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 PSMD8P48556 350 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 MAPK7Q13164 816 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 FSCN1Q16658 493 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 HYIQ5T013 277 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 ADAM2Q99965 735 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 ELAC1Q9H777 363 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 EFCAB1Q9HAE3 211 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 VPS51Q9UID3 782 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 CACNA1FO60840 1977 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 NELFEP18615 380 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 AQP1P29972 269 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 SLC20A2Q08357 652 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 STX5Q13190 355 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 ZNF470Q6ECI4 717 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 EIF3MQ7L2H7 374 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 IKZF2Q9UKS7 526 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 FAM205AQ6ZU69 1335 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 SCGB1D2O95969 90 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 BCL10O95999 233 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 PGK1P00558 417 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 CPA3P15088 417 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 N4BP2L1Q5TBK1 243 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 BEND4Q6ZU67 534 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 S100A9P06702 114 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 PRKAR2AP13861 404 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 ETS1P14921 441 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 YBX3P16989 372 aaKnown RBP eCLIP17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 TMEM114B3SHH9 223 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 UBDO15205 165 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 PHGDHO43175 533 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 ZNF16P17020 682 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 MAXP61244 160 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 GPSM1Q86YR5 675 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 ROPN1BQ9BZX4 212 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 ROPN1Q9HAT0 212 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 FBXO6Q9NRD1 293 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 J3QRK9 145 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 XYLBO75191 536 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 PLGP00747 810 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 CFIP05156 583 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 UQCRBP14927 111 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 ALG9Q9H6U8 611 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 ARHGAP28Q9P2N2 729 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 C9P02748 559 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 CYP2A6P11509 494 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 MUTP22033 750 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 ACVR2BQ13705 512 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 UBA1P22314 1058 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 SMCO1Q147U7 214 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 XKR6Q5GH73 641 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 SLC30A6Q6NXT4 461 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 ZCCHC10Q8TBK6 192 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 FAM110BQ8TC76 370 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 MCRS1Q96EZ8 462 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 TBC1D13Q9NVG8 400 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 KANSL1LA0AUZ9 987 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 ALDH5A1P51649 535 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 TLX1P31314 330 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 PLGLB1Q02325 96 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 PCBP2Q15366 365 aaKnown RBP eCLIP17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 SPANXN2Q5MJ10 180 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 PPP1R15BQ5SWA1 713 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 METTL7BQ6UX53 244 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 ITFG1Q8TB96 612 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 SPATA9Q9BWV2 254 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 MYPNQ86TC9 1320 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 AKAP3O75969 853 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 THRAP10827 490 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 LRRC73Q5JTD7 316 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 FOXRED2Q8IWF2 684 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 FAM126BQ8IXS8 530 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 BRD7Q9NPI1 651 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 TUBGCP4Q9UGJ1 667 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 GMEB2Q9UKD1 530 aa17.13■□□□□ 0.33
CACNA1A-253ENST00000637927 ERCC6L2Q5T890 1561 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 ATP9AO75110 1047 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 RPS6KA3P51812 740 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 CXCL9Q07325 125 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 ATCAYQ86WG3 371 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 LRRC6Q86X45 466 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 DNAJB14Q8TBM8 379 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 RACGAP1Q9H0H5 632 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 EVA1BQ9NVM1 165 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 ABCA6Q8N139 1617 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 SNRPFP62306 86 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 ZNF846Q147U1 533 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 SMARCD1Q96GM5 515 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 MAGEB18Q96M61 343 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 TTLL2Q9BWV7 592 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 C1QTNF7Q9BXJ2 289 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 ZNF780BQ9Y6R6 833 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 UNC13BO14795 1591 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 FOXP2O15409 715 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 GJA8P48165 433 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 SF1Q15637 639 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 P4HA3Q7Z4N8 544 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 MAP3K14Q99558 947 aa17.12■□□□□ 0.33
CACNA1A-253ENST00000637927 WRAP53Q9BUR4 548 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms