RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 BRINP1O60477 761 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 NEBLO76041 1014 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 CALB1P05937 261 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 UGT2B4P06133 528 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 GP1BAP07359 652 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 MYF5P13349 255 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 GPD1P21695 349 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 PDE1CQ14123 709 aaPredicted RBP18.74■□□□□ 0.59
CLN6-220ENST00000637450 ATXN7L2Q5T6C5 722 aaPredicted RBP18.74■□□□□ 0.59
CLN6-220ENST00000637450 LRRC69Q6ZNQ3 347 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 PARGQ86W56 976 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 PYROXD2Q8N2H3 581 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 DENND6BQ8NEG7 585 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 ZNF548Q8NEK5 533 aaPredicted RBP18.74■□□□□ 0.59
CLN6-220ENST00000637450 NEK11Q8NG66 645 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 SNIP1Q8TAD8 396 aaKnown RBP18.74■□□□□ 0.59
CLN6-220ENST00000637450 KLHL32Q96NJ5 620 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 OSBPL1AQ9BXW6 950 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 NOL6Q9H6R4 1146 aaKnown RBP18.74■□□□□ 0.59
CLN6-220ENST00000637450 LIMA1Q9UHB6 759 aaKnown RBP18.74■□□□□ 0.59
CLN6-220ENST00000637450 IPO11Q9UI26 975 aaKnown RBP18.74■□□□□ 0.59
CLN6-220ENST00000637450 KLF15Q9UIH9 416 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 ITM2BQ9Y287 266 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 CSNK1G3Q9Y6M4 447 aa18.74■□□□□ 0.59
CLN6-220ENST00000637450 TCRBV5S1A1TA0A578 114 aa18.73■□□□□ 0.59
CLN6-220ENST00000637450 AREL1O15033 823 aa18.73■□□□□ 0.59
CLN6-220ENST00000637450 RRP8O43159 456 aaKnown RBP18.73■□□□□ 0.59
CLN6-220ENST00000637450 BUB1O43683 1085 aa18.73■□□□□ 0.59
CLN6-220ENST00000637450 DUSP3P51452 185 aaPredicted RBP18.73■□□□□ 0.59
CLN6-220ENST00000637450 PFN3P60673 137 aa18.73■□□□□ 0.59
CLN6-220ENST00000637450 INO80DQ53TQ3 878 aaPredicted RBP18.73■□□□□ 0.59
CLN6-220ENST00000637450 TPRG1LQ5T0D9 272 aa18.73■□□□□ 0.59
CLN6-220ENST00000637450 GDPD4Q6W3E5 623 aa18.73■□□□□ 0.59
CLN6-220ENST00000637450 TTC7BQ86TV6 843 aa18.73■□□□□ 0.59
CLN6-220ENST00000637450 RTL3Q8N8U3 475 aaKnown RBP18.73■□□□□ 0.59
CLN6-220ENST00000637450 CASKIN2Q8WXE0 1202 aa18.73■□□□□ 0.59
CLN6-220ENST00000637450 CENPTQ96BT3 561 aa18.73■□□□□ 0.59
CLN6-220ENST00000637450 ARHGEF26Q96DR7 871 aa18.73■□□□□ 0.59
CLN6-220ENST00000637450 PCDHB1Q9Y5F3 818 aa18.73■□□□□ 0.59
CLN6-220ENST00000637450 H3BM21 787 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 CCP110O43303 1012 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 TMCC1O94876 653 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 EPHB2P29323 1055 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 ACTN2P35609 894 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 ZNF143P52747 638 aaPredicted RBP18.72■□□□□ 0.59
CLN6-220ENST00000637450 C1QBPQ07021 282 aaKnown RBP18.72■□□□□ 0.59
CLN6-220ENST00000637450 EIF2B5Q13144 721 aaKnown RBP18.72■□□□□ 0.59
CLN6-220ENST00000637450 MON1BQ7L1V2 547 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 BAP1Q92560 729 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 PCMTD1Q96MG8 357 aaPredicted RBP18.72■□□□□ 0.59
CLN6-220ENST00000637450 GDAP1L1Q96MZ0 367 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 ERGIC2Q96RQ1 377 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 AGPAT1Q99943 283 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 TTYH3Q9C0H2 523 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 KLC2Q9H0B6 622 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 PRORYQ9H606 182 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 EVA1BQ9NVM1 165 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 MFHAS1Q9Y4C4 1052 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 BPTFQ12830 3046 aa18.72■□□□□ 0.59
CLN6-220ENST00000637450 LGALS16A8MUM7 142 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 WASH4PA8MWX3 477 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 AQP9O43315 295 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 JUNDP17535 347 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 YBEYP58557 167 aaPredicted RBP18.71■□□□□ 0.59
CLN6-220ENST00000637450 UBXN1Q04323 297 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 RAD51Q06609 339 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 TBC1D25Q3MII6 688 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 EFHC2Q5JST6 749 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 ZCCHC8Q6NZY4 707 aaKnown RBP18.71■□□□□ 0.59
CLN6-220ENST00000637450 SCYL2Q6P3W7 929 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 ZNF354CQ86Y25 554 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 ANKRD20A12PQ8NF67 263 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 ABCG4Q9H172 646 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 SEPT11Q9NVA2 429 aaKnown RBP18.71■□□□□ 0.59
CLN6-220ENST00000637450 DKK3Q9UBP4 350 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 FZD10Q9ULW2 581 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 RAI2Q9Y5P3 530 aa18.71■□□□□ 0.59
CLN6-220ENST00000637450 CHD5Q8TDI0 1954 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 RASA4BC9J798 803 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 RASA4O43374 803 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 CREB3O43889 395 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 MMP20O60882 483 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 TIMP2P16035 220 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 AIF1P55008 147 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 RPL7AP62424 266 aaKnown RBP18.7■□□□□ 0.58
CLN6-220ENST00000637450 MYL5Q02045 173 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 SERINC3Q13530 473 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 PTK2BQ14289 1009 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 PPP1R15BQ5SWA1 713 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 DNAJC24Q6P3W2 148 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 UMODL1-AS1Q8N2C9 162 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 NETO2Q8NC67 525 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 IFI44Q8TCB0 444 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 LMX1AQ8TE12 382 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 BTN2A2Q8WVV5 523 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 HMCESQ96FZ2 354 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 DEPDC7Q96QD5 511 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 ANO10Q9NW15 660 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 NCKIPSDQ9NZQ3 722 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 SALL4Q9UJQ4 1053 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms